Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0296 ATGCAAAACCCTCAAAAAGATTCCAAACCCAGCCCTAAATCTCCCTCCTCCTCCCCTCCTCGTCCTCCTCCTGACACCACTCAAAGGGTCGCCGGTGATGTCGCCGCCACAGAACAAGGAGGAAGTAGCGTGGGAGGTATTGCCAGCTCAGACATAGCGAGAATACTCCAGGCGGTCGACCTCACTCCTGGTGGTGGTGGTGGTGGATCTCCAGTACTGTGGGGAGAAACTGGTGGTGGTGAAGGTGGGTCATACGCGCCCGCGGCGGTGAGTTTGGAGGGTGGTGGAGTGGTGGCGGCTTCAACGCTGCTGCCGGAGAAACAGGGGAATAAGCAGAAGAGGAAGTCGTCTCAGGTGTCAGATCCTCCGCCGTGGCCGCCGAAATGCAACGAGTGTGGGAAAGAGTTTTCCAGTTGGAAAGCTGCGTTTGGACACATGAGAGCACACCCTGAACGTGATTATCGCGGTTTCTTTAGACCTCCTACTTCTTCTTCTTCATCACCAAGGCAACGTGTTCGTCTAGAAGAGAATATTAATACAGGTTCGGAACAAGGTGGAGGCGAGAAGGGAGGGTCATCGACGGCTGCGGCGGCTACTGGAGGGGTTGGGTTTGATCTGAATGAGCCTTCGACGGAGGAAGTGGTGGAAGCTTCTGCTTCTGAGGCTGCGCAGGGAAACCAAGCACTGCAATCTTCTTCTTCGTCTGCAGTAAGGAGGACTGATCATCAAGAGGAAAAAAAAGTTGGGTTTGACCTGAACCAACTTCCTCCTTCTGAAGATGATCATGATCAACACAAGCCCTAG 804 0.5386 MQNPQKDSKPSPKSPSSSPPRPPPDTTQRVAGDVAATEQGGSSVGGIASSDIARILQAVDLTPGGGGGGSPVLWGETGGGEGGSYAPAAVSLEGGGVVAASTLLPEKQGNKQKRKSSQVSDPPPWPPKCNECGKEFSSWKAAFGHMRAHPERDYRGFFRPPTSSSSSPRQRVRLEENINTGSEQGGGEKGGSSTAAAATGGVGFDLNEPSTEEVVEASASEAAQGNQALQSSSSSAVRRTDHQEEKKVGFDLNQLPPSEDDHDQHKP 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0296 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 127 154 IPR013087 -
Acco12g0296 267 MobiDBLite consensus disorder prediction 152 267 - -
Acco12g0296 267 MobiDBLite consensus disorder prediction 60 89 - -
Acco12g0296 267 ProSitePatterns Zinc finger C2H2 type domain signature. 129 149 IPR013087 -
Acco12g0296 267 MobiDBLite consensus disorder prediction 1 48 - -
Acco12g0296 267 MobiDBLite consensus disorder prediction 101 130 - -
Acco12g0296 267 MobiDBLite consensus disorder prediction 159 189 - -
Acco12g0296 267 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 62 166 - -
Acco12g0296 267 MobiDBLite consensus disorder prediction 220 237 - -
Acco12g0296 267 SUPERFAMILY beta-beta-alpha zinc fingers 126 152 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0296 Acco-ChrAcco12 2581172 2582201 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0296 129 172 C2H2 Transcription Factor Family AT4G35280 51.020 5.60e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco12g0296 None None None