Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0266 ATGATCAAGGACGAAGTTGAGAGCTGCGCGAGTCGAGCCGTACAATCACAGAAAGCTCATCCTCGTCATCACAGCCAGAAATTGGAGGTGTACAATGAGGTGCTCCGTCGAATTCGAGAGTCCAATCATGAGGAGGCCAATATTCCAGATTTTGATGATCAACTATGGCTTCATTTTAATCGTCTTCCCGCTAGGTACGCATTCGATGTGAATGTGGAGAGGGCAGAAGACGTTCTTGCTCATATGAGACTCCTGAAGTTGGCAGAGGACCCTGCTTTTCGACCTGCACTCCAAGTTCGCTTAGTACAGGTACAACCCTTTGGTAGTGCAAGTTATGGTAACTCTATGCACTCAGATCCCTCTGAGAATGAAGATGCACAAAGCTCTTTTAAGCAGGAAAAAAGAATTCATCTGCCACCTACTTTTGGTTCATCCTCTAATCTTGAAGCTCTTTCACGTAAAAGAAGTAAAAATAATATTGAAGATGAGGACGGTGCTATGGATGTGATACCATATCCTTTCCAGCCCATGCATGAGATTACTTTTTCAACAGTTGACAAGCCTAAAGTCTTAAGTCAGTTAACTGCATTACTTAGCGAGATTGGATTGAACATTCAAGAAGCCCATGCATTTTCCACCAACGATGGCTTTTCTCTTGATGTATTTGTTGTTGATGGTTGGCCTAATGAGGATGCTGAGGAACTCAAAGCTGTATTGGAAAAAGAAATTTTGAAATGTAAGGGCACACATTATGCTGCCGATGACCATGATCAGGAAAGGATGGAACACCTTCCTCGTTGCATTGAAATACCGTCTGATGGAACTGATGTCTGGGAAATTAATGCCAACCTGTTGAAATTTGAAGACAAAGTTGGCTCTGGATCATTCGGTGATTTGTACAAAGGCACATATTGCAGTCAAGTTGTGGCTATCAAAGTCCTCAAACCTGAGCGTACAAACACAGACATGTTGAGAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGGCACAGGAATGTTGTGCAATTCATTGGAGCATGTACTCAGCCACCAAATCCGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCCTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCTTCTTTGCTAAAAGTGGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATCATACACAGGGACCTCAAGACCGCCAATCTGCTGATGGATGAAAATGAAGTGGTGAAGGTTGCTGATTTTGGGGTTGCCAGAGTGAAGATACAATCTGGAGTGATGACAGCTGAAACTGGAACTTACCGTTGGATGGCTCCAGAGATCATTGAACACAAACCTTACGACCAGAAAGCAGATGTCTTTAGTTTTGGAATAACTCTTTGGGAGCTTCTAACCAGAGAACTGCCTTACTCTTACTTGACTCCATTACAAGCAGCAGTAGGCGTGGTGCAAAAGGGTCTAAGACCTACGATCCCCAAGAGCACACACCCAAGACTTTCTGAACTTCTCCAACGTTGCTGGCAACAAGATCCAAAAGATAGACCCGAATTCTCCGAAATAATAGAGATTCTTCAGTTGATAGCTAAAGAGGTTGTTGATGAAAAAGCAAATAATCACAAAGATAAATCACCCCACGGCTTTCTCTCAACACTCAAATGGGGCCATCACTGA 1701 0.4256 MIKDEVESCASRAVQSQKAHPRHHSQKLEVYNEVLRRIRESNHEEANIPDFDDQLWLHFNRLPARYAFDVNVERAEDVLAHMRLLKLAEDPAFRPALQVRLVQVQPFGSASYGNSMHSDPSENEDAQSSFKQEKRIHLPPTFGSSSNLEALSRKRSKNNIEDEDGAMDVIPYPFQPMHEITFSTVDKPKVLSQLTALLSEIGLNIQEAHAFSTNDGFSLDVFVVDGWPNEDAEELKAVLEKEILKCKGTHYAADDHDQERMEHLPRCIEIPSDGTDVWEINANLLKFEDKVGSGSFGDLYKGTYCSQVVAIKVLKPERTNTDMLREFAQEVYIMRKIRHRNVVQFIGACTQPPNPCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVKIQSGVMTAETGTYRWMAPEIIEHKPYDQKADVFSFGITLWELLTRELPYSYLTPLQAAVGVVQKGLRPTIPKSTHPRLSELLQRCWQQDPKDRPEFSEIIEILQLIAKEVVDEKANNHKDKSPHGFLSTLKWGHH 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0266 566 Gene3D Phosphorylase Kinase; domain 1 274 363 - -
Acco12g0266 566 ProSiteProfiles Protein kinase domain profile. 285 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0266 566 MobiDBLite consensus disorder prediction 139 153 - -
Acco12g0266 566 ProSitePatterns Protein kinases ATP-binding region signature. 291 312 IPR017441 GO:0005524
Acco12g0266 566 FunFam Serine/threonine-protein kinase isoform 1 275 363 - -
Acco12g0266 566 SUPERFAMILY ACT-like 177 241 IPR045865 -
Acco12g0266 566 FunFam serine/threonine-protein kinase HT1 364 555 - -
Acco12g0266 566 PRINTS Tyrosine kinase catalytic domain signature 359 372 IPR001245 GO:0004672|GO:0006468
Acco12g0266 566 PRINTS Tyrosine kinase catalytic domain signature 396 414 IPR001245 GO:0004672|GO:0006468
Acco12g0266 566 PRINTS Tyrosine kinase catalytic domain signature 461 483 IPR001245 GO:0004672|GO:0006468
Acco12g0266 566 PRINTS Tyrosine kinase catalytic domain signature 442 452 IPR001245 GO:0004672|GO:0006468
Acco12g0266 566 PRINTS Tyrosine kinase catalytic domain signature 505 527 IPR001245 GO:0004672|GO:0006468
Acco12g0266 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Acco12g0266 566 Pfam Protein tyrosine and serine/threonine kinase 285 534 IPR001245 GO:0004672|GO:0006468
Acco12g0266 566 SUPERFAMILY Protein kinase-like (PK-like) 269 534 IPR011009 -
Acco12g0266 566 Gene3D - 178 247 - -
Acco12g0266 566 SMART serkin_6 285 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0266 566 CDD ACT_TyrKc 177 244 - -
Acco12g0266 566 ProSiteProfiles ACT domain profile. 179 263 IPR002912 -
Acco12g0266 566 CDD STKc_MAP3K-like 291 534 - -
Acco12g0266 566 MobiDBLite consensus disorder prediction 112 164 - -
Acco12g0266 566 Gene3D Transferase(Phosphotransferase) domain 1 364 558 - -
Acco12g0266 566 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 140 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0266 Acco-ChrAcco12 2347116 2354019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0266 2 565 MAP Kinase Kinase Kinase AT4G35780 68.063 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco12g0266 PK_Tyr_Ser-Thr 5.3e-74 CL0016