Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0256 ATGTCGGAGAATGGCGAGACGGGGAGAAGTTATCTTCACGGCGACCTGGACTTGACCATCTTTGAGGCTCGAAACTTGCCCAACATGGATTTTTTCTCCGAGCATTTCCGCCGTTGCGTCACCGCATGTGACACTGTCAAGTGCCGTTCCGTTGAATACCAGAAGGCCCGCCGTCGCCGGAGGATTATCACTAGCGACACATACGTCACCGTCTCAGTGCCGCAGGCTACTGTTGCCCGCACGCGTGTGATAAAGAATATGCCGAACCCTCAGTGGAACGAGCGATTCAGTATACCCTTAGCCCACCCCGTGGAGAATTTGGAATTTAGAGTCAAAGACGACGACGTATTTGGTGCTCAGCTCGTGGGAACTGTCAATATTCCTGCACAGAGAATTGCCTCCGGTGAGTTTATCGCCGGATGGTTCCCCATTCTTGGTTCTTCCGGTAAGCCTCCCAAGCCAGACACCGCACTTCGTATAGAAATGAAATTCGTAGCCGTGGAAGAGAACATGTTGTACCGGCGAGGCATTGCAGCTGATCCAGAGCACAAGGGCGTGGGGCAAACGTATTTTCCTGTACGGAAGGGAAGTTCAGTGAGGTTGTACCAAGATGCCCATGTCCCTGATGGCATTTTACCTGAGATAAAGCTAGAGGACGGAGAGGTTTACAAGCATGGAAAGTGTTGGGAGGATATTTGTTATGCTATATCTGAGGCTCATCATATGGTTTATCTTGTGGGTTGGTCAATCTACCACAAAGTGAAGATTGTGAGGGAACCTAGCAGGCCTTTGCCACGAGGTGGAGATTTGACTCTTGGTGAATTGCTCAAATACAAATCTGAAGAAGGGGTGCGAGTTCTCTTGCTGATTTGGGATGATAAGACTTCCCATGACAAGTTGTTCTTCAAGTCGGCTGGAGTAATGCAGACACATGATGAAGAAACCAGGAAATTTTTTAAACATTCTTCTATTATGTGTGTTCTAGCACCTCGGTATGCTAGCAGCAAGTTGAGTTATATAAAGCAACAAGTTGTTGGAACTGTTTTCTCTCATCACCAAAAATGTGTCCTTGTCGACACGCAGGCTTTTGGTAATAACCGTAAGATAACTGCTTTTTTAGGAGGCCTTGATCTATGTGATGGTCGCTACGACACACCTGAGCATCGACTTTTTCGTGATCTTGATACCGTATTTTTGGGTGATTTTCACAATCCTACATTTTCAGCTGGAACAAGGGCTCCTAGGGAACCATGGCATGATTTGCACTGCAGAATAGATGGACCTGCTGCATATGACGTTCTTCTTAATTTTGAACAGCGTTGGAGAAAAGCAACCAAGTGGAGAGAGTTTGGAATACTTTTCAAAAAGGCTTCCCATTGGCATGATGACGCATTACTGAAAATAGAACGCATCTCATGGATATTAAGTCCTTCCTTCCCTCGCTCAAAGGATGGTAGCACGACTGTTCCAGGAGATAATCCTTTACTATGGGTCAACAACGAAGATGATCCTGATAACTGGCACGTTCAGATATTACGCTCCATTGACTCAGGATCCCTGAAAGGATTTCCCAAAAGTGTTGATATTGCTCAGTCCCAGAATCTTACCTGCGCAAAAAATTTAGCTATAGATAAAAGCATTCAAACAGGGTACATTCAAGCGATTAGATCTGCTCAACACTTTATCTATATTGAAAACCAATATTTTCTTGGATCGTCATATGCTTGGCCATCTTATAAGGATGCAGGAGCTGATAATCTCATTCCAATGGAACTAGCACTCAAAATTGCTAGTAAAATCAGAGCCAAGGAGAGATTTGCAGTGTATATTCTTTTACCAATGTGGCCAGAGGGTGATCCTAATTCAGCGGTCATGCAAGAAATCCTCTTTTGGCAGAGCCAGACAATGCAAATGATGTACGATATTGTTGCAAGAGAATTAAAGTCAATGGAACTAGTTGATTTGCACCCACAAGATTACCTGAACTTCTATTGCCTTGGTAACCGGGAAGAATTCCATGAAGAAGACTCAAGTTCAGATGGTGCTTCGGTCTCCAATTCGCATAAATATCGCCGATTTATGATTTATGTGCATTCTAAGGGGATGATTGTTGACGATGAGTATGTTATCGTGGGATCTGCTAATATAAATCAAAGGTCCATGGCTGGCACAAAAGATACTGAGATAGCCATGGGTGCATATCAACCTCATTACACTTGGTTTGCTAAGAAAAGACATCCAAATGGTCAGATTTATGGTTACAGAATGTCACTGTGGGCAGAGCATCTTGGGTTGTTAGACGCCAATTTTGAAGAACCAGAGAGTTTGGAATGTGTGCGTAAGGTGAATTCCATCGCTGAAGAGAATTGGAGAAGATACACATCAGAGAACTTCTCATTATTGCGGGGACATATTCTGAAGTATCCTGTACAAGTAGATGTTGATGGGAAGGTTAGTCCTTTACCTGAATATGAGACTTTTGTGGATGTTGGCGGGAAAGTAATGGGATCTCATTCCCCTACAATTCCTGATATTCTAACAACTTAG 2547 0.4397 MSENGETGRSYLHGDLDLTIFEARNLPNMDFFSEHFRRCVTACDTVKCRSVEYQKARRRRRIITSDTYVTVSVPQATVARTRVIKNMPNPQWNERFSIPLAHPVENLEFRVKDDDVFGAQLVGTVNIPAQRIASGEFIAGWFPILGSSGKPPKPDTALRIEMKFVAVEENMLYRRGIAADPEHKGVGQTYFPVRKGSSVRLYQDAHVPDGILPEIKLEDGEVYKHGKCWEDICYAISEAHHMVYLVGWSIYHKVKIVREPSRPLPRGGDLTLGELLKYKSEEGVRVLLLIWDDKTSHDKLFFKSAGVMQTHDEETRKFFKHSSIMCVLAPRYASSKLSYIKQQVVGTVFSHHQKCVLVDTQAFGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFLGDFHNPTFSAGTRAPREPWHDLHCRIDGPAAYDVLLNFEQRWRKATKWREFGILFKKASHWHDDALLKIERISWILSPSFPRSKDGSTTVPGDNPLLWVNNEDDPDNWHVQILRSIDSGSLKGFPKSVDIAQSQNLTCAKNLAIDKSIQTGYIQAIRSAQHFIYIENQYFLGSSYAWPSYKDAGADNLIPMELALKIASKIRAKERFAVYILLPMWPEGDPNSAVMQEILFWQSQTMQMMYDIVARELKSMELVDLHPQDYLNFYCLGNREEFHEEDSSSDGASVSNSHKYRRFMIYVHSKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHYTWFAKKRHPNGQIYGYRMSLWAEHLGLLDANFEEPESLECVRKVNSIAEENWRRYTSENFSLLRGHILKYPVQVDVDGKVSPLPEYETFVDVGGKVMGSHSPTIPDILTT 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0256 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 347 382 IPR001736 GO:0003824
Acco12g0256 848 SMART pld_4 347 382 IPR001736 GO:0003824
Acco12g0256 848 SMART pld_4 693 720 IPR001736 GO:0003824
Acco12g0256 848 Pfam Phospholipase D Active site motif 347 382 IPR001736 GO:0003824
Acco12g0256 848 Pfam Phospholipase D Active site motif 694 720 IPR001736 GO:0003824
Acco12g0256 848 Pfam C2 domain 14 144 IPR000008 -
Acco12g0256 848 Gene3D Endonuclease Chain A 218 462 - -
Acco12g0256 848 PIRSF PLD_plant 1 848 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco12g0256 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 693 720 IPR001736 GO:0003824
Acco12g0256 848 SMART C2_3c 15 141 IPR000008 -
Acco12g0256 848 FunFam Phospholipase D delta 219 463 - -
Acco12g0256 848 PANTHER PHOSPHOLIPASE D 10 837 IPR015679 -
Acco12g0256 848 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Acco12g0256 848 Gene3D C2 domain 13 174 IPR035892 -
Acco12g0256 848 SUPERFAMILY Phospholipase D/nuclease 188 453 - -
Acco12g0256 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 149 IPR035892 -
Acco12g0256 848 Gene3D Endonuclease Chain A 513 740 - -
Acco12g0256 848 SUPERFAMILY Phospholipase D/nuclease 545 778 - -
Acco12g0256 848 Pfam Phospholipase D C terminal 768 837 IPR024632 -
Acco12g0256 848 CDD C2_plant_PLD 11 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0256 Acco-ChrAcco12 2253373 2259107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0256 1 684 Phospholipase D Gene Family (Wang group) AT4G35790 69.109 0.0 1022