Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0244 ATGGAGGCTGATATTGATTCAGTAAGTTCTTCATCATCATCATCCTACTACACCATTCTCGGTGTCGATTCTGATTCTTCTCTTGAAGAAATAAGGCGCGCTTATCGCAGGCTTGCAATGCAATGGCATCCGGATAGGTGGACAAGAACACCTTCTCTACTGGGAGAAGCGAAACGAAAGTTCCAGCAGATTCAGGAAGCCTATTCAGTATTGTCGGACGAAAGCAAAAGAACGATGTACGATGCAGGCTTGTACGATCCCCAAGAAGAAGAGGACGAGGGGTTTTATGAGTTTGTGCAAGAGCTGAAGACGCAAGTGAGCAGAGAGGAGAGGGAATATAGCATAGAGGAGTTGCAGAGCATGCTAATGGAAATGGCTCAAGGATTTGAGGATCCTCCATGGCAATTTGAAGCATCACCAGTGGAAGAGGAAAGTCACTGTTCAAAGAGGGCCAGGCTGGACTCTAACTTGAACATGAATTTGGGGTCATCACCTTTCTATGAGCCTGGGTTTCATTTGTATGAAACCAGAGGTTACTGTAATTAG 546 0.4542 MEADIDSVSSSSSSSYYTILGVDSDSSLEEIRRAYRRLAMQWHPDRWTRTPSLLGEAKRKFQQIQEAYSVLSDESKRTMYDAGLYDPQEEEDEGFYEFVQELKTQVSREEREYSIEELQSMLMEMAQGFEDPPWQFEASPVEEESHCSKRARLDSNLNMNLGSSPFYEPGFHLYETRGYCN 181
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0244 181 Coils Coil 99 119 - -
Acco12g0244 181 ProSitePatterns Nt-dnaJ domain signature. 61 80 IPR018253 -
Acco12g0244 181 SMART dnaj_3 14 76 IPR001623 -
Acco12g0244 181 PRINTS DnaJ domain signature 17 35 IPR001623 -
Acco12g0244 181 PRINTS DnaJ domain signature 56 76 IPR001623 -
Acco12g0244 181 PRINTS DnaJ domain signature 35 50 IPR001623 -
Acco12g0244 181 Pfam DnaJ domain 16 81 IPR001623 -
Acco12g0244 181 PANTHER PUTATIVE, EXPRESSED-RELATED 11 141 - -
Acco12g0244 181 SUPERFAMILY Chaperone J-domain 12 87 IPR036869 -
Acco12g0244 181 Gene3D DnaJ domain 3 111 IPR036869 -
Acco12g0244 181 ProSiteProfiles dnaJ domain profile. 15 84 IPR001623 -
Acco12g0244 181 CDD DnaJ 16 73 IPR001623 -
Acco12g0244 181 Coils Coil 54 74 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco12g0244 Acco-ChrAcco12 2134667 2135975 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0244 7 82 C2H2 Transcription Factor Family AT1G74250 44.156 2.19e-13 65.5