Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco12g0243 | ATGACTCTTACAGGTCTGGTTTCGCTTGTGTTCGATTTCATTGGTCTTGTCCCTTACAAGGTCAATCATCAGAAGCAGGGAATTGCAAGTGAATCATCGGCACAAGCACCGAGTTTGATCGAAGTTGATTGGTGTTGTGTGTGTTTGTCGAGGTTGAAGGAGGAAGAAGAGACAAAGATTCTTCCTTGCTTTCACAGATTCCATAAACCCTGTGTGGATAAATGGCTCAATGTTAATAAGGGTCGCCACAAAACATGTCCTCTGTGTCGGTTCTCAATGGTGGCAGAGGATCAGAATAATAAGTCTCTTGATGCTTCTTCTGCAGAATTCACTGAGGACATGCTTGATCCTGTTCATGTGGAATTTATTTGGCCCCCTAACTTGTGCTATTGGTGA | 396 | 0.4343 | MTLTGLVSLVFDFIGLVPYKVNHQKQGIASESSAQAPSLIEVDWCCVCLSRLKEEEETKILPCFHRFHKPCVDKWLNVNKGRHKTCPLCRFSMVAEDQNNKSLDASSAEFTEDMLDPVHVEFIWPPNLCYW | 131 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco12g0243 | 131 | Pfam | Ring finger domain | 44 | 90 | IPR001841 | - | |
Acco12g0243 | 131 | PANTHER | TARGET OF ERK KINASE MPK-1 | 23 | 96 | - | - | |
Acco12g0243 | 131 | SUPERFAMILY | RING/U-box | 39 | 95 | - | - | |
Acco12g0243 | 131 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 30 | 108 | IPR013083 | - | |
Acco12g0243 | 131 | SMART | ring_2 | 45 | 89 | IPR001841 | - | |
Acco12g0243 | 131 | ProSiteProfiles | Zinc finger RING-type profile. | 45 | 90 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco12g0243 | Acco-ChrAcco12 | 2130557 | 2131307 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco12g0243 | 29 | 93 | C3H Transcription Factor Family | AT1G26800 | 43.478 | 5.85e-14 | 63.9 |