Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0238 ATGATCGCTCATCTCTGTGTGAAGAGTTCAGCTGAAAGCCTTCAGATACGCATTTTGTTGAACATATCTGAGAAAACAATTGATACAGGCATGTCCATGAATCTGGAACGAATTGTCTTAGTGCTGAGTTTGATTGCTTGTAGAACAATGATTGATGAAGATTTTTTCACCGAGTATGGGGAGGCTAGTCGGTACAAAATTCTAGAAGTTATTGGCAAGGGTAGCTATGGTGTTGTTGCATCTGCAGTTGATAGACACAGTGGAGAAAGGGTAGCTATCAAGAAGATGAACAATGTATTTGAAAATAAGTCTAGTGCCATTCGCATCCTTTGGGAAATAAAGCTCCTTCGCCTGCTCAAACATCCAGATATAGTAGAAATAAAGCACATCATGCTCCCTCCATGCCAAAGAGAATTTAAAGACATTTATGTGGTGTTCGAGTTGATGGAATCTGATCTTGATGAGGTTATTGAAATAAACCATGATCTCACCCCTGGACACCGCCAATTCTTCTTGTACCAGCTCCTTCGAGCTCTAAAGTACATACATTCAGCGAATGTCTTCCACAGAGACTTGAAACCAAAGAACATTCTGGCTAATGCAGACTGCAAACTCAAGATTTGTGATTTTGGGCTTGCCCGTGCATCATTTGATGATGTCCCATCTGCTATTTTTTGGACAGATTATGTGGCGACTCGATGGTACCGTGCTCCGGAGCTATGTGGCTCTTTTTTCTCCAAGTACACCCCTGCCATAGATATCTGGAGCATAGGATGTATTTTTGCGGAACTGCTATCTGGGGAGCCTTTATTTCCTGGAAAGAATGTGAAGCATCAATTGGATCTCATGACTGATTTGCTTGGAACTCCTCCTGCAGAATGCATTGCAAGGATTAGAAATGAAGAAGCTAGAACATATTTAAATAGCATGGGGAGAAAGCCATCCATTCCTTTGTCAGAAAAATTTCCTCATGCAGACCCAATGGCTCTTCATTTACTTCAGCGCTTGCTTGCGTTTGATCCTATGGAGCGTCCATCTGCTAAAGAGGCGCTAGCTGATCCCTATTTTCATGGGTTGGCTAATTTGGCTGATGAACCATCCATGAAACCAATTTCAAAGTTTGAGTTCGAGTTTGATAGTAAAAAATTGACCGAAGATGATGTAAGAGAATTAATATATAGAGAGATTTTAGAATATCATCCAGAGATGCTGCGGGAGTATGTACGCGATGCAGGGAAGACTAGCTTTATGTATCCCAGTGGACTTGATGGCTTCAAGCACCAATTTGCTGATCTTGAGGAAAATAATGGAAGAGTAGAAAGAAGCAAGCGCAGAGCAGAAAGAAGAACATTGCTTTATAGGAAATATGCCTCATTGCCCAGAGAGCGAGTTTGTGCAGCCAATGAAGAGGAAGAGGAGGAGAAAACGGACAGAAATTCACATAAGAAGGAGAATGCAGCTTCTGTTGTGCGTGCAACGATTCTGAGTCCTCCTAGGTCCCGGAATGGTAAAGAAATAGAAGATGCTCGCCGGAAGTCAATAATAATGCAGAACAACCGATGCAATACAGCTTACTGTCATAGAATGGTAAAGAGTGCTAGTGTGAATATGTTTGCAGTTGTTATGGATACAAAATCCAGGAAGTAA 1647 0.4165 MIAHLCVKSSAESLQIRILLNISEKTIDTGMSMNLERIVLVLSLIACRTMIDEDFFTEYGEASRYKILEVIGKGSYGVVASAVDRHSGERVAIKKMNNVFENKSSAIRILWEIKLLRLLKHPDIVEIKHIMLPPCQREFKDIYVVFELMESDLDEVIEINHDLTPGHRQFFLYQLLRALKYIHSANVFHRDLKPKNILANADCKLKICDFGLARASFDDVPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLSGEPLFPGKNVKHQLDLMTDLLGTPPAECIARIRNEEARTYLNSMGRKPSIPLSEKFPHADPMALHLLQRLLAFDPMERPSAKEALADPYFHGLANLADEPSMKPISKFEFEFDSKKLTEDDVRELIYREILEYHPEMLREYVRDAGKTSFMYPSGLDGFKHQFADLEENNGRVERSKRRAERRTLLYRKYASLPRERVCAANEEEEEEKTDRNSHKKENAASVVRATILSPPRSRNGKEIEDARRKSIIMQNNRCNTAYCHRMVKSASVNMFAVVMDTKSRK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0238 548 FunFam Mitogen-activated protein kinase 151 379 - -
Acco12g0238 548 FunFam Mitogen-activated protein kinase 54 160 - -
Acco12g0238 548 CDD STKc_TDY_MAPK 64 401 - -
Acco12g0238 548 Coils Coil 429 449 - -
Acco12g0238 548 SUPERFAMILY Protein kinase-like (PK-like) 61 361 IPR011009 -
Acco12g0238 548 Gene3D Phosphorylase Kinase; domain 1 81 402 - -
Acco12g0238 548 SMART serkin_6 65 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0238 548 Pfam Protein kinase domain 65 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0238 548 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 64 410 - -
Acco12g0238 548 Gene3D Transferase(Phosphotransferase) domain 1 151 379 - -
Acco12g0238 548 ProSitePatterns Protein kinases ATP-binding region signature. 71 95 IPR017441 GO:0005524
Acco12g0238 548 ProSiteProfiles Protein kinase domain profile. 65 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0238 Acco-ChrAcco12 2083557 2088541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0238 51 536 MAP Kinase Gene Family AT3G18040 68.916 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Acco12g0238 Pkinase 5.4e-66 CL0016