Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0232 ATGGTTCTTTCATTAAACAACAACCTTCTTCTATTCTTCTTCTCCTCTATGGAGCCTAATGGGACCTCCTCCACCAACTACAACAACAGAGATGATGTGCCGTCGCATTGCCTCCAAATAACCACGGAGGAAACTCACAAGGTGGTGGCGCCACCACGCCGGACCACCCTGGAGAAGCTGAGCGCCAAGCTCAAAGAAATGTTCTTCCCTGATGACCCTCTTCGCCAATTCAAGGGTCAGCCGTTGAAGAATAAGCTGGTGCTCGCAGCACAGTATTTGTTCCCTATTCTTCAATGGGGTCCCAATTACAGCCTCACCCTCTTCAAATCCGACGTCGTTTCTGGCCTCACCATTGCCAGCTTGGCCATCCCTCAGGGAATCAGTTATGCTAAGCTAGCAAGCCTTCCTCCGATTGTGGGACTCTATTCGAGCTTTGTGCCACCTCTGGTTTATGCTGTGCTGGGAAGTTCAAGGGACCTTGCTGTGGGACCCGTGTCTATTGCTTCTCTCGTATTGGGTTCGATGCTGAGGCAAGAGGTGTCTCCAGCTTCAGACCCTGTTCTGTTTCTTGAGCTGGCTTTCACTTCTACCTTCTTCGCTGGTCTCTTTCAAGCGTCTCTTGGAATCCTAAGGCTAGGGTTCATCATTGACTTCTTATCAAAGGCCATTCTGATTGGGTTTATGGCAGGAGCAGCCATTATTGTGTCTCTTCAACAACTAAAAAGCTTACTGGGAATCACACATTTCACTCCCCAGATGGGCCTAGTCCCTGTGATGACCTCAGTTTTTCACAATATCCATGAGTGGTCATGGCAAACAATAGTTATGGGGCTTTGCTTCTTGGTGTTACTTCTGCTGGCAAGATACGTTAGCATGAGGAAGCCAAAGCTTTTCTGGGTCTCAGCTGGTGCTCCTCTTGTGTCTGTCATAATCTCTACCCTTCTGGTATTTGCAATAAAGGCTCAGAGTCATGGAATCAGTGTCATAGGAAAATTGCAAGAAGGCCTAAATCCTCCTTCATGGAATATGCTGCGCTTTCATGGAACTCATCTGGGTCTTGTAATCAAAACTGGGATTATCACTGGCATTTTGTCCCTCACTGAAGGTATTGCAGTAGGAAGGACTTTTGCAGCTCTCAAGAACTACAAAGTGGATGGAAATAAGGAGATGATGGCGATCGGCCTCATGAATATGGTGGGCTCCTTCACTTCCTGCTATGTTACTACAGGTGCTTTCTCTAGATCAGCCGTCAATAACAATGCAGGAGCAAAATCAGCTGTGTCAAACATAGTAATGTCCATAACAGTTATGGTGACACTTTTATTTCTCATGCCACTGTTTCAATACACTCCAAACGTTGTACTAGGAGCAATCATAGTCACAGCAGTCATTGGTCTCATTGACATCCCTGCTGCTTATTTCATCTGGAAGTTCGACAAATATGACTTTATTGTGATGCTCACTGCATTCTTCGGCGTCATTTTTATCTCTGTTCAAGAAGGCCTTGCCCTAGCTATTGGATTGTCAATTTTGAAGATTCTTCTGCAAGTTACAAGGCCTAAGACAGTGATGTTGGGAAACATACCAGGTACTGATATATATCGAAATATTGATCATTATGAGGAAGCAGTGAAGTTGCCAGGTTTTCTCATTTTAAGCATTGAAGCTCCCATCAATTTCGCTAACATTACATATCTCAACGAGAGGATCTTACGATGGATAGAAGAATATCAAGAGGAAGATAACAAAAAGAAAATATCAAGTCTTCGTTATGTGATTCTGGAAATGTCAGCTGTGAGCAACGTAGACACAAGTGGAGTGTCACTTTTCAGAGAACTGAAACAGGCAATGAACAATAAGGGCGTTGAGATTGTGCTGGTGAATCCTCTGGCTGAGGTTATGGAGAAGTTGAAGAAAGCAGATGCAGGCAATAATGAGTTGATAAGAGAAGATAATCTTTTCTTAACAGTTGGGGAGGCCGTGGCTTCGCTTTCATCGATGACGAAAGGCCAGGCATCAAATATGGAAGAAGGGGCACAAGCATTTCCTCACATCTGA 2058 0.447 MVLSLNNNLLLFFFSSMEPNGTSSTNYNNRDDVPSHCLQITTEETHKVVAPPRRTTLEKLSAKLKEMFFPDDPLRQFKGQPLKNKLVLAAQYLFPILQWGPNYSLTLFKSDVVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPASDPVLFLELAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTPQMGLVPVMTSVFHNIHEWSWQTIVMGLCFLVLLLLARYVSMRKPKLFWVSAGAPLVSVIISTLLVFAIKAQSHGISVIGKLQEGLNPPSWNMLRFHGTHLGLVIKTGIITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGLMNMVGSFTSCYVTTGAFSRSAVNNNAGAKSAVSNIVMSITVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAAYFIWKFDKYDFIVMLTAFFGVIFISVQEGLALAIGLSILKILLQVTRPKTVMLGNIPGTDIYRNIDHYEEAVKLPGFLILSIEAPINFANITYLNERILRWIEEYQEEDNKKKISSLRYVILEMSAVSNVDTSGVSLFRELKQAMNNKGVEIVLVNPLAEVMEKLKKADAGNNELIREDNLFLTVGEAVASLSSMTKGQASNMEEGAQAFPHI 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0232 685 Coils Coil 630 650 - -
Acco12g0232 685 Pfam STAS domain 540 660 IPR002645 -
Acco12g0232 685 SUPERFAMILY SpoIIaa-like 544 664 IPR036513 -
Acco12g0232 685 CDD STAS_SulP_like_sulfate_transporter 540 657 - -
Acco12g0232 685 PANTHER SULFATE TRANSPORTER 57 666 IPR001902 GO:0016020|GO:0055085
Acco12g0232 685 ProSitePatterns SLC26A transporters signature. 137 158 IPR018045 GO:0008271|GO:0008272
Acco12g0232 685 FunFam Sulfate transporter 31 519 667 - -
Acco12g0232 685 Gene3D STAS domain 519 666 IPR036513 -
Acco12g0232 685 NCBIfam sulfate permease 95 660 IPR001902 GO:0016020|GO:0055085
Acco12g0232 685 ProSiteProfiles STAS domain profile. 539 664 IPR002645 -
Acco12g0232 685 Pfam Sulfate permease family 108 488 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0232 Acco-ChrAcco12 2020818 2026456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0232 41 672 Inorganic Solute Cotransporters AT3G15990 65.348 0.0 842