Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0226 ATGTCTGATTCATTCAAGGTTCAGCCTCTCACTACTCCAAATTCCACCCTTAATTCTCATGCACCTCCCAAAATCATACCTTTCTGTATTTGCACCCACTGCACCAATCTCATCTCTTTGAATCATTCTCTGGGAGGAGAAGGATTGAAATCTCAGCAAAGCACGAGCAGGTGGAGTCCAACGCCGGCACAGTTACTGGTGCTTGAAGAACTGTACAGACAAGGTACAAAGACGCCAACGGCTGAACAAATACAGCAAATAGCTTCACAGCTACGTCGTTTTGGCAAGATCGAAGGCAAGAACGTGTTCTACTGGTTCCAGAATCATAAAGCTAGAGAGCGCCAGAAACGACGTCGCCGGGAAATGGAGGAGAGAGCTACTGCTTCTGATTCAGCACAAGACAAGCAACTGTACGTTGTTAATGTGAGAAGCTCAGAGGAAAAGCAAGACTCGACAGCAGGTTATCAAGTTAAAGAGACAAAGGAGTGGGCATCTTCAAACTGTAGTGCCCTTCCACAGGAAATAGCAGATATTGGACCAAAAGGGTGGACTCAACTTGAAGAGAAAAGAACACAAGTTTTGAAACCAGAGCAAACAACACCTCTCTCACAAAACTTGTCCTCTCAAAATCATAATTTACCATTTATAATCAACAGAGAAAACTGCACCTACTGTGATGAAGAAGAATATTCAAACACAAGAACCCTTGAGCTTTTTCCTCTCAAGAAAGGTGACCAACATGGCATGTCTCTCAATGACAGGAAATCTAGGCTTTGTGCATCAACTTCCCTTGGCACAGAAGTTGCCACCTCAAGCCAGTTTTTTGAGTTCCTTCCTTTGAAAGACTGA 849 0.4382 MSDSFKVQPLTTPNSTLNSHAPPKIIPFCICTHCTNLISLNHSLGGEGLKSQQSTSRWSPTPAQLLVLEELYRQGTKTPTAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRREMEERATASDSAQDKQLYVVNVRSSEEKQDSTAGYQVKETKEWASSNCSALPQEIADIGPKGWTQLEEKRTQVLKPEQTTPLSQNLSSQNHNLPFIINRENCTYCDEEEYSNTRTLELFPLKKGDQHGMSLNDRKSRLCASTSLGTEVATSSQFFEFLPLKD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0226 282 CDD homeodomain 57 111 IPR001356 GO:0003677
Acco12g0226 282 MobiDBLite consensus disorder prediction 113 157 - -
Acco12g0226 282 Gene3D - 46 132 - -
Acco12g0226 282 SUPERFAMILY Homeodomain-like 48 118 IPR009057 -
Acco12g0226 282 SMART HOX_1 53 120 IPR001356 GO:0003677
Acco12g0226 282 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Acco12g0226 282 MobiDBLite consensus disorder prediction 131 157 - -
Acco12g0226 282 Pfam Homeodomain 55 115 IPR001356 GO:0003677
Acco12g0226 282 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 48 277 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0226 Acco-ChrAcco12 1976995 1979734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0226 55 174 Wox Gene Family AT3G18010 55.372 4.10e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco12g0226 Homeodomain 1.7e-19 CL0123