Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0197 ATGTTTGCCTCAACGATCCTAACACCGTCTAAACTGAAAACTTGGCATTTCGTGTTAGTCCCACCAAACACCAGCATAGAAATCTTCCCAACTGGAAGCAGAAGAACATACAGGAGGAGCAGAGTGTCAGCTTATTCTAAATTAGCCCATCAAAGTTTCCGTCTTTACCTGAAATCGAACATTAGACCTATAGTGGCCACGAGGGTCAGTAATGGCGATGATGGCGGGTTTGGTGCTACCTCACAACAGTCTTCCCCTCCTCCTTCTGACATGGAAGAAGAGAAGAAGAGTACCTCTTCTGGCCTTGGTGACGGTTATGTGGCCTTGTTTGTTCGAATGTTAGGCTTAGATCATGATCCTCTTGATAGGGAACAGGCTATAACTGCTCTGTGGGAATATTCACTTGGCGGAAAGAAGTGTGTTGATACTTTAATGCAATTTCCTGGCTGTATCAATCTAACTGTGAACCTCCTTAGATCAGATTCTAGTTTAGCATGTGAAGCAGCTGCTGGCCTTTTGCGATCTCTATCTTCAGTCAATCTATACAGGAATTCAGTAGCAGAGAGTGGAGCAATAGAAGAGATAAATAGACTGCTGAGGCAGTCTTCCTTGGCACCTGAGGTAAAGGAGCAGAGTATGAGTACATTGTGGAATTTATCTGTGGATGAGAAGCTCCGCCTTAAACTTGCAAATAGTGATTCCCTACCATTGATTATTAAGTACCTTGAAGACGAGGATGTAAAAGTGAAGGAAGCTGCGGGAGGCATATTGGCAAATTTAGCTTTGAGCCATGTTAACCACAGCATTTTGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACTTCTGATCTTGAAGGATCCAAAGTCATTAAAAAGGAAGCAAAAAGTGCGTTGCTGGAATTTGTTAAGGATGAATATTATAAAATTCTTCTTGTCGAGGAGGGTCTGGTTCCTGTGCCACTGATTGGTGCTGAGGCATACAAGTCATTCTCCCCTGATTTGCATTCATGGCCCAAATTTCCAGATGGTACAGAGATTGAACGGGCTTCTCCAAAACCTTCCCGTTCCACATATGGTGCATCAGAATTACTTGTTGGACTTAATATCGATGATAAGAGCGCTGACATAGAGGAGGCAAAAGTTAATGCGATTGAGGGACAGGCAGAACAACTATTGCTTGTTCGTATTGGAGCTGTAGAATGGGATTCTGAAAGCTCTGACAGGCAGCAACTTACACTTTTACCTTGGAAGTCTGGCATTGCTCGCTTGGCACTTATTCTAGAACTAGAAGATAAGTCTGCCATAAAAAGGGCTGCAGAATCAATAGCTGATGTATCTATCAATGAACATATGCGCATTGCATTCAAGGAGGCTGGAGCTGTTAAGCATTTAGTTCAGCTTTTGAATTGCGATGATGATGCTGTCAGATTGGCTGTAACTCAAGCTTTGGAGAGGTTGTCCACCAGCAACGGAGTCTGCCAGTATATTGAATCTGAGGGAGCGCTAAGTCCTTTAGTTAACGTTCTAAAATACTCAGAGATATCTGAAACTATTGCAGAAAAGTCTTTGAATACAATTGCTCGCATACTAGACCCCAGTAAAGAGATGAAATTGAAGTTTTATGATGAACCAATTAATGGATCTGGGAAGGCCTCAAGTGGAGTTCGAAATGGTGCTGTTTCGGCTAGCTCAAGTACCACTGAATATCCGATATCAAAGACCACTACCAGGAATGATGTACTGGATTCTGCTTTTGTTGCCCGCCTTGTTGAGATTCTGAAGTCCTCTTCTCCCAGTTTACAAGCAAAAGCTGCTTCAATTCTCGAGTTTGTTGCATTGACTGACCCAACTATGGTCTCTACTATATATGTAGATATTGAATCTGCTCTCGATGAAGTCTTTCAGCAAAAAATTTTGAGAATTTCAGGTGGAGAACCTGATGTAGAAGATCAGGTTTCAGAAGCATACCCGATAGAAGTTGAAGAAGCCGGACTTGCCATATCAGCAGCATCCCGGTTAATGACAAGACTACTTGACTATCAGCATTTTCGCGACAAAGTAAACTCCTCCCATTTCATCGGCTTGCTCCGAAAAATCCTCAAGTCTTGTATACCTCTCCACACCAAAGACTGGGTGGCTGCTTGCCTAGTTAAACTCAGCCCTCTCTCCAGTGACAACCCAAGTCTTGACCCAATCAATGTGGAAGTTACAGTTTATGAGACAATCCCAAGACTCGTAGAACAGATTAAAACTTCCTTCTCCCTGGAAGCACAGGAATCTGCTGTTGTAGAACTGAACAGAATAATATCTGAAGAAGCGGTTCATTTTGCTAGAGCTATTGTATCAGAGGGAGCAATTTATCCATTGGTGAAGCTGATAGAAGACGGAAGTGAAAGGGCCATTGAAGCAGGATTGGCCATATTGTATAATCTAAGCATGGACTCTAAGAACCATTCATTGATTGTGGCTGCTGGGGCTGCCCCTGTATTGAGAAGGATTGTGCTCTCACAAAGGCCTCAATGGGAAAAGGCACTTCATTTACTCAGGAATTTGCCTACTTGA 2571 0.4282 MFASTILTPSKLKTWHFVLVPPNTSIEIFPTGSRRTYRRSRVSAYSKLAHQSFRLYLKSNIRPIVATRVSNGDDGGFGATSQQSSPPPSDMEEEKKSTSSGLGDGYVALFVRMLGLDHDPLDREQAITALWEYSLGGKKCVDTLMQFPGCINLTVNLLRSDSSLACEAAAGLLRSLSSVNLYRNSVAESGAIEEINRLLRQSSLAPEVKEQSMSTLWNLSVDEKLRLKLANSDSLPLIIKYLEDEDVKVKEAAGGILANLALSHVNHSILVEAGVIPKLAKFLTSDLEGSKVIKKEAKSALLEFVKDEYYKILLVEEGLVPVPLIGAEAYKSFSPDLHSWPKFPDGTEIERASPKPSRSTYGASELLVGLNIDDKSADIEEAKVNAIEGQAEQLLLVRIGAVEWDSESSDRQQLTLLPWKSGIARLALILELEDKSAIKRAAESIADVSINEHMRIAFKEAGAVKHLVQLLNCDDDAVRLAVTQALERLSTSNGVCQYIESEGALSPLVNVLKYSEISETIAEKSLNTIARILDPSKEMKLKFYDEPINGSGKASSGVRNGAVSASSSTTEYPISKTTTRNDVLDSAFVARLVEILKSSSPSLQAKAASILEFVALTDPTMVSTIYVDIESALDEVFQQKILRISGGEPDVEDQVSEAYPIEVEEAGLAISAASRLMTRLLDYQHFRDKVNSSHFIGLLRKILKSCIPLHTKDWVAACLVKLSPLSSDNPSLDPINVEVTVYETIPRLVEQIKTSFSLEAQESAVVELNRIISEEAVHFARAIVSEGAIYPLVKLIEDGSERAIEAGLAILYNLSMDSKNHSLIVAAGAAPVLRRIVLSQRPQWEKALHLLRNLPT 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0197 856 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 787 829 IPR000225 GO:0005515
Acco12g0197 856 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 190 234 IPR000225 GO:0005515
Acco12g0197 856 MobiDBLite consensus disorder prediction 72 100 - -
Acco12g0197 856 SUPERFAMILY ARM repeat 110 325 IPR016024 -
Acco12g0197 856 Gene3D - 83 327 IPR011989 -
Acco12g0197 856 SMART arm_5 451 491 IPR000225 GO:0005515
Acco12g0197 856 SMART arm_5 576 616 IPR000225 GO:0005515
Acco12g0197 856 SMART arm_5 222 262 IPR000225 GO:0005515
Acco12g0197 856 SMART arm_5 776 816 IPR000225 GO:0005515
Acco12g0197 856 SMART arm_5 178 221 IPR000225 GO:0005515
Acco12g0197 856 SMART arm_5 263 306 IPR000225 GO:0005515
Acco12g0197 856 SMART arm_5 492 534 IPR000225 GO:0005515
Acco12g0197 856 Gene3D - 664 856 IPR011989 -
Acco12g0197 856 Pfam Armadillo/beta-catenin-like repeat 451 490 IPR000225 GO:0005515
Acco12g0197 856 SUPERFAMILY ARM repeat 433 843 IPR016024 -
Acco12g0197 856 MobiDBLite consensus disorder prediction 74 88 - -
Acco12g0197 856 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 233 275 IPR000225 GO:0005515
Acco12g0197 856 Gene3D - 408 639 IPR011989 -
Acco12g0197 856 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 68 856 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0197 105 325 U-box Gene Family AT2G23140 28.125 3.88e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0197 12 1707662 1713207 Acco12g0197 12 1707662 1713207 ECH