Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0185 ATGGACAAGCCTGTCTTCTTGAACTGTTCCATATTGTCTCTCATCATTATTCTCTCTTTCATGGCTTTGCATGCAACTGAAGCTAATTCCTTCTCTTGCCTCCATACTCCATACCCTCATGTCTGCAACCACTACATGACCACTAATACACTCTCAACTTCTTCTTCTTCCTCCTTTCATGATTTGGCTCTTAAGGTCACTTTGGACCAAGCCATTGAAGCCCACCAACTAGTCTCAACTATGAAACTGGACAAACGCTTCACAGACAAGAGAGCCAAGTTGGCCTGGACTGATTGTTTAGAGCTCTATGAAGACACGGTTCACCAGCTGAACCGAACCGTTACGAGCTCCAAAAATCTCAACGACAGGCTCACCTGGTTAAGTGCCGCCATTGCGAATCACCAAACTTGCCAACATGGCTTCCTTGACTTCCACCTCCATGCGCACCTCAACTTCTTCCCAAATATGCTCACTAACTTCTCCAAACTGATCAGCAATTCCTTAGCCATTACCAGTGCCATGTCCACAACTCAAATTGATAAAATTAATAGTAAAAATAATAATGGTGGGAGAAAGTTGTTGTTTGAAGGATTATTCTTCCCCGACTGGGTTTCGAGGTCAGATAGGAGGCTTCTTGCCGGGGAGGTGGCGCCGGCGGCGGATGTGGTGGTGGCGAAAGATGGGAGTGGGAACTATAAGACGATAACGGAGGGGGTGGAGGCGGCGAGTAAGATTAGTGGCGGCGGAGGGAGGAGGGTGGTGGTGCACGTAAAAGGGGGAGTGTATGAAGAGAACGTGGTGATAAAGAGGAGAATGAAGAATGTGATGATTGTTGGAGATGGGATTGGTGTTACCGTTGTTTCTGGGAGCAACAGTGCTCAAGAAACCACCACTTTTAGGTCTGCAACTTTTGCTGTTTCTGGAGACAACTTCATGGCCCGAGATATATCCTTCGAGAACACCGCCGGACCTGGGAGTCACCAGGCGGTGGCTTTTCGCTCCGGCGCCGACCACTCTGTGTTCTACCGGTGCAGCTTCAAGGGCTACCAAGACACTCTTTACGTCTACGCACATCGCCAATTCTACCGTGATTGTGACGTCTACGGCACCGTTGACATCATCTTCGGCGACGCCGTCGCTATATTCCAGAACTGCAACATCTACGTGAGAAGGCCGATGAGCAACCAGCAGAACACGGTGACGGCGCAGGGGAGATCCGACCCGAACGAGAACACCGGCATTATTCTCCACGGCTGCCTCGTGACCGCGTCGTCGGACTTGAGGTCGGTGCAGGGCTCGTTCAAGACCTTTCTTGGCCGGCCGTGGAAGGAGTACTCGAGGACGGTGGTGATGAAGAGCAACCTCGACGGACTGATCCACCCGGAAGGGTGGATGCCATGGAGTGGCAGCTTCGCTCTGAAGACTCTATATTACGGGGAATATATGAACACCGGAAGCGGAGCCGCCACCGGTGGGAGGGTGAAATGGCCAGGGTTTCACGTGATCACTAGTCCGGTGGAGGCCGGAAAGTTCACTGTCGGGAACTTTCTTGCCGGCCAGTCGTGGCTTGCTGGCACCGGCGTACCGTTTGACGCTGGACTATGA 1605 0.5178 MDKPVFLNCSILSLIIILSFMALHATEANSFSCLHTPYPHVCNHYMTTNTLSTSSSSSFHDLALKVTLDQAIEAHQLVSTMKLDKRFTDKRAKLAWTDCLELYEDTVHQLNRTVTSSKNLNDRLTWLSAAIANHQTCQHGFLDFHLHAHLNFFPNMLTNFSKLISNSLAITSAMSTTQIDKINSKNNNGGRKLLFEGLFFPDWVSRSDRRLLAGEVAPAADVVVAKDGSGNYKTITEGVEAASKISGGGGRRVVVHVKGGVYEENVVIKRRMKNVMIVGDGIGVTVVSGSNSAQETTTFRSATFAVSGDNFMARDISFENTAGPGSHQAVAFRSGADHSVFYRCSFKGYQDTLYVYAHRQFYRDCDVYGTVDIIFGDAVAIFQNCNIYVRRPMSNQQNTVTAQGRSDPNENTGIILHGCLVTASSDLRSVQGSFKTFLGRPWKEYSRTVVMKSNLDGLIHPEGWMPWSGSFALKTLYYGEYMNTGSGAATGGRVKWPGFHVITSPVEAGKFTVGNFLAGQSWLAGTGVPFDAGL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0185 534 CDD PMEI-like_3 32 176 - -
Acco12g0185 534 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 174 IPR035513 -
Acco12g0185 534 Pfam Pectinesterase 221 519 IPR000070 GO:0030599|GO:0042545
Acco12g0185 534 Gene3D - 216 534 IPR012334 -
Acco12g0185 534 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 175 IPR035513 -
Acco12g0185 534 PANTHER PECTINESTERASE 16 524 - -
Acco12g0185 534 FunFam Pectinesterase 215 534 - -
Acco12g0185 534 SUPERFAMILY Pectin lyase-like 217 533 IPR011050 -
Acco12g0185 534 SMART PMEI_2 23 170 IPR006501 GO:0004857
Acco12g0185 534 ProSitePatterns Pectinesterase signature 2. 367 376 IPR033131 -
Acco12g0185 534 Pfam Plant invertase/pectin methylesterase inhibitor 32 170 IPR006501 GO:0004857
Acco12g0185 534 NCBIfam pectinesterase inhibitor domain 11 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0185 Acco-ChrAcco12 1629835 1632349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0185 3 534 Carbohydrate Esterase AT1G23200 51.075 0.0 533