Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0173 ATGGAGATGGATTTCTTGGGTCTAAGCTCAAAAGAACCATTAGCTATGGTGAAGGAGGAGATTAACAATGATGTATGCAAAGATTCAGGCTTCACTAAGGGTTCAGCTGTACAATGGCCCTTCTCCAACAAAGTCTCTGCTCTCCCACATTTGATGTCTTTTAAGGTTTCTCAAGATGACAAGACCAAGAAGATGGGGTCTGATCCTCTCACATCTGCTGGATTTATGGCTGATGCATTTGATGTTGCTCAAAAACGCTCTGTTGCTGAAATCCAGAAACCTTTCAATCACGATGTGCAAAGTGGTTTTCATTTTTCCCTGGCTCCTTATCCTGTACCAAATGATGTGCTTTCGCTGAATCGTCCTCAAGATGTGAAGATGTTTTCGGCTCCCAATCAAGCAATTTCTGTTTCCATGGGGCACCCTTTCTTGAAGAACCATTTCACCACCGCGGGTCAGAATATGGCTGGTAATAATGTGAAGCAACAGCTGCTTGGGGGTATACCTGTTTCCTTGCCTCATTTAGTACCCACCACCATCGGTTCTGTTCCTGCAATGACTGAATCATGTTTGAAGTCATCTGCACCTCCCTGTCAACTCACCATTTTCTATGCTGGTACTGTGAATGTTTTTGATGATATCACCCCTGAGAAGGCACAAGCTATCATGCTGTTGGCTGCGAATGGGTTACCAGTGACTTCTAACAGGGCACAGCCGAACATTCAGGCACCAAACTCAAAGTTGACTTCAGGTGAAGGTGTCCCTGTGAGTCAACCCACAAATACATTGCCTTGTCCTAGTCTTTCCAGTCCTCTATCTGTTTCTTCACATACGGGTACACAGTCAAGGAGTGGCTCAACCAGCTCTGATGAGCTTCTGGCAGCTAAAACTACCGGAGTTCCCTCCACTCCTGTTAGCAAAGTGGAGCCTCCAAAAGTAGTTATCGCAACTGCTATGTTGCCTTCTGCTGTGCCACAGGCTCGCAAAGCATCACTGGCACGATTTTTGGAGAAGCGCAAAGAAAGGGTGATGAATGCCGCAGCACCATATAACCTAAGCAAGAAAACTGAGGATGTTACTAATATCTCTGCAACTACTTCTGCTGCTTCTAGCATCATATCAGCCAAGCAAGCATAG 1137 0.4556 MEMDFLGLSSKEPLAMVKEEINNDVCKDSGFTKGSAVQWPFSNKVSALPHLMSFKVSQDDKTKKMGSDPLTSAGFMADAFDVAQKRSVAEIQKPFNHDVQSGFHFSLAPYPVPNDVLSLNRPQDVKMFSAPNQAISVSMGHPFLKNHFTTAGQNMAGNNVKQQLLGGIPVSLPHLVPTTIGSVPAMTESCLKSSAPPCQLTIFYAGTVNVFDDITPEKAQAIMLLAANGLPVTSNRAQPNIQAPNSKLTSGEGVPVSQPTNTLPCPSLSSPLSVSSHTGTQSRSGSTSSDELLAAKTTGVPSTPVSKVEPPKVVIATAMLPSAVPQARKASLARFLEKRKERVMNAAAPYNLSKKTEDVTNISATTSAASSIISAKQA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0173 378 Pfam Jas motif 325 350 IPR018467 -
Acco12g0173 378 Pfam tify domain 197 227 IPR010399 -
Acco12g0173 378 ProSiteProfiles Tify domain profile. 193 228 IPR010399 -
Acco12g0173 378 MobiDBLite consensus disorder prediction 234 307 - -
Acco12g0173 378 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 138 356 IPR040390 -
Acco12g0173 378 MobiDBLite consensus disorder prediction 234 304 - -
Acco12g0173 378 SMART tify_2 193 228 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0173 Acco-ChrAcco12 1513331 1516515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0173 37 356 Tify Gene Family AT3G17860 35.882 1.44e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco12g0173 tify 4e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0173 12 1513331 1516515 Acco12g0173 12 1513331 1516515 ECH