Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0154 ATGGTCCCTACCTGTCAACGAATCCCTATCCCTCCGAGAACCGCCCTTTTCCTTCGTTTTTATTTTCCCTTTTTTCATATCACTCTACCTCGGAGGTCGAAAGCTTTCACGGCTTCAACCCCGAATTCTTGTATCACTCGCTGTTGCTTCTACTACTACTCCTACTACTACTTTCACTATTCAATTTTTTCCAATTCTCATTTCAATTATGCACCATTCTTTCTCCTTCTAGCGATGTCGTCAGAAAGTTTTCCCACTACCGGGGCTGAACCCCACGCGCCTCTCCTTCGTTCCCGCCAGGGATCCACTGATGCACCCAGGACTCCTACACTTGCGCTCCTTCTCGGCCGTGCCGTTGGCCGTCGGGGACCCTCCATGCTGGTGCGGGAGACGGCAGCTCGCGAGCTGGAAGAGAGGAGGGCCGATTGGGGCTACTCGAAGCCTGTTGTGGTTCTTGACATCTCGTGGAATATGGCCTTTGTGGTGGTGTCAATTGTGATGCTTCTTTTGACGACCCACGAAAAGACTATCACGCCGATCCGGGTCTGGATCTGCGGGTACGCGCTGCAGTGCTTGGTTCATGTGGTTCTTGTGTGGCTCGAGTATAGGAGGCGGGCTAGGAGGGTTTCGCGGATGCGGAGGGCTCAGGATGGTGATATTGAAGCTCGTAATGTTGAGGATATCAACGAAAGTGAGGATGATGAAGCTGGAGATGGGAGTTCATCGAACTCGACTCGCTCCGGATTCACAAAACGATGTGAATCAGTGAATACCATGGTTTCTTTCCTTTGGTGGATAGTTGGTTTTTATTGGGTGATCTCAGGTGGTGACGCTCTTCTGCAAGATGCTCCTCGTTTGTATTGGCTGGCTGTTGTTTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGCGTTGTTTTGGCCTGCTTGATTGGCATTGCCCTCTGTTGTTGTTTGCCATGCATCATTGCTATTCTCTATGCAGTTGCTGGACAGGAAGGTGCATCAGAAGCAGATCTTAGTCTACTTCCGAAATATAAATTTCGCATGTTAAACAATGAGGAAAAGCCTACTGGTGGAGCAGGATCGATGGTTCCTACAGAAACGAGTAGTGGGTACCTGGCAAATGAAAGAATACTTCTACCTGAAGATGCGGAATGCTGCATATGTCTCACTTCATACGAGGATGGAGCAGAACTCAATACTCTACCATGCAACCATCATTTCCATTCTACATGCATTGTGAAATGGTTGAAAATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTTAAGGGAAATGAACAGGTGTGA 1317 0.4799 MVPTCQRIPIPPRTALFLRFYFPFFHITLPRRSKAFTASTPNSCITRCCFYYYSYYYFHYSIFSNSHFNYAPFFLLLAMSSESFPTTGAEPHAPLLRSRQGSTDAPRTPTLALLLGRAVGRRGPSMLVRETAARELEERRADWGYSKPVVVLDISWNMAFVVVSIVMLLLTTHEKTITPIRVWICGYALQCLVHVVLVWLEYRRRARRVSRMRRAQDGDIEARNVEDINESEDDEAGDGSSSNSTRSGFTKRCESVNTMVSFLWWIVGFYWVISGGDALLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSLLPKYKFRMLNNEEKPTGGAGSMVPTETSSGYLANERILLPEDAECCICLTSYEDGAELNTLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0154 438 SUPERFAMILY RING/U-box 375 432 - -
Acco12g0154 438 SMART ring_2 387 427 IPR001841 -
Acco12g0154 438 SMART FANCL_C_2 383 435 - -
Acco12g0154 438 Pfam Ring finger domain 386 428 IPR001841 -
Acco12g0154 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 331 433 IPR013083 -
Acco12g0154 438 ProSiteProfiles Zinc finger RING-type profile. 387 428 IPR001841 -
Acco12g0154 438 FunFam E3 ubiquitin protein ligase RIE1 367 435 - -
Acco12g0154 438 PANTHER TARGET OF ERK KINASE MPK-1 118 436 - -
Acco12g0154 438 MobiDBLite consensus disorder prediction 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0154 Acco-ChrAcco12 1343267 1350083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0154 79 437 C3H Transcription Factor Family AT1G68070 68.245 1.67e-179 503