Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0150 ATGGCGATGGCGATGGAGATAGAAGGAGAGGTACGGAATAACGCCGGCAAGAGGCTGAAATGTATGAAGAATGAAGAAAAGGGCAAAACAGAGGAGGAAGCTGCGGAGGATGACAGTGAGCTTCCTCTCAGGCCTGGCCTCTTCTATTATCCAACCACTCCTACGTCTTTCGTTGTTTCCGATGCTCTTGAACCCGATTTTCCCATCATCTATGTCAACAAGGTCTTTGAATTCGTCACAGGCTATCGTGCCGATGAGGTTTTGGGTCGCAGCTGTCGGTTCTTACAGTATAGGGACCCTCATGCTCAAAGGAGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATCAGAAGATGTCTTGAGGAAGGTGTCGAGTTCCAAGGTGAACTTCTGAATTTCAGGAAGGATGGCATTCCTTTAGTAAACAGGCTGAGACTTGCTCCAATTCATGATGATAATGGAACTATGACACATGTAATAGGCATCCAGCTATTTTCTGAAGCAAATATTGATCTCAATTGTGTCTCATATCCGGTGTTCAAGGAGACCTGCAGTCAGGAAATTGATAACACTGGTAAAAATTCTCTCAAGAGTGGACAACTAATATACAGCCAGCGCCAAGAGATGTGTGGCATTCTTCAGCTTTCTGATGAGGTCTTGGCTCATAACATCTTATCACGCTTGACACCAAGGGATGTTGCATCAATTGGGTCTGTGTGCAGAAGGATCCGTCAATTAACACAGAATGAGCATGTTAGAAAGATGGTGTGTCAAAATGCATGGGGAAAAGAAGTGACTGGTGCATTGGAACTGATGACCAAGAAGTTAGGATGGGGTCGTCTTAGCCGAGAACTAACCACTCTTGAGGCTGTTTGTTGGAGAAAAGTGACAGTGGGAGGTGCAGTAGAGCCTTCACGCTGCAATTTCAGTGCTTGTGCTGCAGGAAATCGCCTTGTATTGTTTGGAGGTGAGGGAGTTGATATGCAGCCTATGGACGACACTTTCGTCCTCAATCTTGATGCTAAAAATCCTGAGTGGCGAAGGATTAGTGTGAAATCATCGCCACCAGGAAGGTGGGGCCACACACTCTCATGCTTAAATGGTTCTTGGTTGGTGGTATTTGGAGGATGTGGTAGGGAAGGATTACTTAATGACGTGTTTGTTCTTGATTTGGATGCTCAACAGCCAACGTGGAAAGAAGTCTGTGGCAGAACTCCGCCTCTCCCTAGATCTTGGCACAGCTCTTGCACTCTTGAAGGGTCTAAATTGGTAGTCTCAGGTGGGTGCACAGACGCTGGGGTGCTTCTTAGTGACACATACCTACTGGACCTTACTACAGATAATCCAACATGGAAAGAAATTCCAACTTGGGCTCCTCCTTCTCGGTTGGGGCACTCACTGTCTGTATATGGCAGGACAAAAATTCTCATGTTTGGTGGACTTGCCAAGAGCGGACACTTGCGATTACGATCAGGTGAGGCTTATACAATTGATTTGGAAGACGAAGAGCCTCAGTGGAGGCAGCTAGAATGTAGTGCATTCTCTGGAATAGGTGGTCAAAGTGCTGTAGTTCCTCCACCTCGGCTAGATCATGTCGCAGTGAGCATGCCTTGTGGGAGGATTATTATTTTTGGAGGCTCCATTGCAGGGCTTCATTCTCCATCCCAACTCTTTCTTTTGGACCCATCCGAGGAGAAACCATCATGGAGGATCCTCAACGTGCCAGGGCAACCGCCAAAATTTGCTTGGGGTCACAGCACTTGTGTGGTTGGAGGGACTAGGGTTTTGGTTTTGGGTGGACATACAGGGGAGGAGTGGATACTTAATGAGTTGCATGAGTTATGCTTAGCAAGCAGGCAGGACTCCGACCTAAGGTGA 1881 0.4721 MAMAMEIEGEVRNNAGKRLKCMKNEEKGKTEEEAAEDDSELPLRPGLFYYPTTPTSFVVSDALEPDFPIIYVNKVFEFVTGYRADEVLGRSCRFLQYRDPHAQRRHPLVDPVVVSEIRRCLEEGVEFQGELLNFRKDGIPLVNRLRLAPIHDDNGTMTHVIGIQLFSEANIDLNCVSYPVFKETCSQEIDNTGKNSLKSGQLIYSQRQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTQNEHVRKMVCQNAWGKEVTGALELMTKKLGWGRLSRELTTLEAVCWRKVTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRISVKSSPPGRWGHTLSCLNGSWLVVFGGCGREGLLNDVFVLDLDAQQPTWKEVCGRTPPLPRSWHSSCTLEGSKLVVSGGCTDAGVLLSDTYLLDLTTDNPTWKEIPTWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEEPQWRQLECSAFSGIGGQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSDLR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0150 626 FunFam Adagio protein 1 47 175 - -
Acco12g0150 626 FunFam Putative LOV domain-containing protein 489 621 - -
Acco12g0150 626 NCBIfam PAS domain S-box protein 68 163 IPR000014 -
Acco12g0150 626 CDD F-box_AtADO-like 212 258 - -
Acco12g0150 626 Gene3D - 285 488 IPR015915 GO:0005515
Acco12g0150 626 Gene3D PAS domain 50 175 - -
Acco12g0150 626 ProSiteProfiles PAS repeat profile. 69 100 IPR000014 -
Acco12g0150 626 Pfam F-box domain 213 250 IPR001810 GO:0005515
Acco12g0150 626 Gene3D - 206 257 - -
Acco12g0150 626 Pfam Galactose oxidase, central domain 421 471 - -
Acco12g0150 626 Pfam Galactose oxidase, central domain 372 418 - -
Acco12g0150 626 FunFam Putative LOV domain-containing protein 284 488 - -
Acco12g0150 626 SUPERFAMILY Kelch motif 294 511 IPR015915 GO:0005515
Acco12g0150 626 Pfam PAS domain 63 163 IPR000014 -
Acco12g0150 626 Gene3D - 489 620 IPR015915 GO:0005515
Acco12g0150 626 SUPERFAMILY F-box domain 207 288 IPR036047 GO:0005515
Acco12g0150 626 SUPERFAMILY Kelch motif 525 615 IPR015915 GO:0005515
Acco12g0150 626 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 34 619 - -
Acco12g0150 626 Pfam Galactose oxidase, central domain 307 357 - -
Acco12g0150 626 CDD PAS 53 163 IPR000014 -
Acco12g0150 626 SUPERFAMILY PYP-like sensor domain (PAS domain) 64 164 IPR035965 -
Acco12g0150 626 Pfam Kelch motif 530 577 IPR011498 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0150 Acco-ChrAcco12 1310212 1314201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0150 52 165 AGC Kinase Gene Family AT5G58140 42.105 7.92e-21 95.5