Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0139 ATGGTTTCAAGATCTTACTCAAATCTATTGGACCTAGCCTCTGGTGACTCTCCATCATTTGGGTTTATGAACCGTGGGATTCCCAGGATTATGACAGTGGCTGGTTTGATTTCTGAGGTTGATGACGACCCAGTTGAGAGTGTGAACTCTGATCCCTCGTCGTCGGTCCACCGTGAACGGATCATAATAGCGGGCAACCAGCTTCCAATCAGGGCTCAGAAAAAGGCCGATGGTAGTACTAGTAATAGTGGTGGCGGTGGTACTAGGAATTGGTTGTTTCAGTGGGATGATAACTCACTTCTTCTTCAGTTGAAAGATGGATTAGGTGATGATGATATTGAAGTTATTTATGTTGGGTGTCTCAAGGAAGAAATTCACCCAAATGAACAAGATGAGGTCTCACAATTCCTCCTTGAAAATTACAGATGTGTTCCTACCTTTCTCCCTTCTGATCTGTTTTCAAGATACTATCATGGGTTTTGCAAGCAGCAGCTATGGCCTTTGTTTCACTATATGTTGCCTTTGTCACCAGAACTTGGTGGTAGATTCAATAGGTCACTCTGGCAGGCTTATGTATCTGTGAATAAGATTTTTGCTGATCGAATTATGGAAGTGATTAACCCTGATTACGATTATGTTTGGATCCATGATTATCATCTAATGGTACTTCCTACATTCTTGAGGAAGAGATTTAACAGGGTGAAACTGGGGTTTTTCCTCCATAGCCCATTCCCTTCTTCAGAAATTTACAAGACATTGCCCATTAGAGAAGAACTACTGAGAGCTCTTTTGAATTCAGATTTGATAGGCTTCCACACATTTGATTATGCACGCCATTTTCTGTCCTGTTGTAGCCGGATGCTTGGCCTTAGCTACGAATCAAAGCGGGGTTATATTGGGCTTGAGTATTATGGTAGGACTGTTAGCATTAAAATTCTCCCTGTTGGTATCCACATGGGTCAGCTTCAACAAGTGTTAAGCCGTACTAAGACAGAAGAGAAAGTTGCTGAGCTCATTCAGCAATTTTCAGGCAGAGGAAGGACATTGATGCTTGGAGTTGATGATATGGATATCTTCAAGGGTATAAGTTTGAAGCTTTTGGCAATGGAACAGCTTCTTATACAACATCCAGAGTGGCAAGGGAAGGTTGTATTGGTCCAGATTGCAAACCCAGCCCGGGGCAAAGGGAAAGATGTAAAGGAAGTGCAAGCTGAGACAAAGGCAACGGTTAAAAGGATAAACGAAACATTTGGGAAACCTGGGTATGATCCTGTCATTCTGATTGAGGAGCCACTCAAGTTCTATGAGAAAGTTGCGTACTATACTGTTGCTGAGTGTTGTCTAGTCACTGCAGTTAGGGACGGAATGAATCTCATACCGTATGAATACATAATTAGTCGTCAAGGAAATGAAAAATTGGATAAAGTTTTAGGACTATGTTCCTCTCCTAAGAAGAGCATGTTGGTTGTCTCTGAGTTCATAGGTTGTTCCCCATCGTTAAGTGGAGCAATCAGAGTGAACCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCTGCCCTGGAAATGGCTGATTCAGAGAAACAGCTCAGGCATGAGAAGCATTATAGATATGTTAGTACCCATGATGTTGGTTACTGGGCTCGAAGCTTCTTGCAGGATTTGGAAAGGACTTGTAGTGATCATGTTAGGCGAAGGTGGTGGGGAATCGGGTTTGGATTGGGTTTTAGAGTTGTGGCACTTGATCCAAACTTCAAGAAGCTCTCAATGGAGCACATAGTTGCAGCCTACAAGCGAACAAAAACTCGGGCGATCCTTCTAGATTATGATGGTACACTAATGCCTCAAGCTTCCATTGACAAGAGTCCAACAAGTAAAACTATTGAAATTCTTAGTAGCTTGTGTAGAGACAAGAACAGCATGGTGTTTCTTGTTAGTGCTAGGAGCCGCAAAACACTTTCTGAATGGTTTTCTCCTTGTGAAAATCTGGGAATTGCCGCTGAGCATGGCTACTTTCTAAGACTGAAGCGTGATGCAGAATGGGAAACATGTGGACCAGCAACAGACTGTAGCTGGAAACAGATTGCTGAGCCTGTGATGAAGCTTTATACTGAAACAACTGATGGATCCACTATTGAAGATAAAGAGACTGCACTTGTGTGGTGTTATGAGGATGCAGATCCAGATTTCGGATCATGCCAAGCCAAGGAACTTCTTGATCATCTTGAGAGTGTGCTTGCAAATGAACCTGTCACTGTCAAGAGTGGCCAGAACGTTGTAGAGGTTAAGCCCCAGGGGGTAAGCAAAGGGATAGTGGTGAAGCGCTTGCTTTCGACCATGCAAGAGAATGAGATATCACCTGATTTTGTGTTGTGCATAGGAGATGATAGGTCTGATGAAGACATGTTTGAGGTAATCTCCAGTTCCATGGCTGGTCCCACCCTAGCAGCAAGGGCTGAGGTATTTGCATGCACGGTTGGCCAGAAACCGAGCAAAGCCAAGTATTATCTGGATGACACAGCTGAGATAGTGAGACTGATGCATGGACTGGCCTCTGTTTCAGAACAAACAGTTCTGGTTTAA 2586 0.4339 MVSRSYSNLLDLASGDSPSFGFMNRGIPRIMTVAGLISEVDDDPVESVNSDPSSSVHRERIIIAGNQLPIRAQKKADGSTSNSGGGGTRNWLFQWDDNSLLLQLKDGLGDDDIEVIYVGCLKEEIHPNEQDEVSQFLLENYRCVPTFLPSDLFSRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPDYDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQQVLSRTKTEEKVAELIQQFSGRGRTLMLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGKGKDVKEVQAETKATVKRINETFGKPGYDPVILIEEPLKFYEKVAYYTVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLCSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLGFRVVALDPNFKKLSMEHIVAAYKRTKTRAILLDYDGTLMPQASIDKSPTSKTIEILSSLCRDKNSMVFLVSARSRKTLSEWFSPCENLGIAAEHGYFLRLKRDAEWETCGPATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNVVEVKPQGVSKGIVVKRLLSTMQENEISPDFVLCIGDDRSDEDMFEVISSSMAGPTLAARAEVFACTVGQKPSKAKYYLDDTAEIVRLMHGLASVSEQTVLV 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0139 861 Pfam Glycosyltransferase family 20 88 557 IPR001830 GO:0003824|GO:0005992
Acco12g0139 861 FunFam Trehalose-6-phosphate synthase 2 687 766 - -
Acco12g0139 861 NCBIfam trehalose-phosphatase 602 851 IPR003337 GO:0003824|GO:0005992
Acco12g0139 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 560 - -
Acco12g0139 861 CDD GT20_TPS 60 557 IPR001830 GO:0003824|GO:0005992
Acco12g0139 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 603 720 - -
Acco12g0139 861 Pfam Trehalose-phosphatase 607 841 IPR003337 GO:0003824|GO:0005992
Acco12g0139 861 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 733 860 - -
Acco12g0139 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 323 - -
Acco12g0139 861 FunFam Alpha,alpha-trehalose-phosphate synthase 325 541 - -
Acco12g0139 861 Gene3D Glycogen Phosphorylase B; 53 324 - -
Acco12g0139 861 Gene3D Glycogen Phosphorylase B; 325 541 - -
Acco12g0139 861 SUPERFAMILY HAD-like 604 849 IPR036412 -
Acco12g0139 861 CDD HAD_TPP 605 846 - -
Acco12g0139 861 Gene3D - 603 735 IPR023214 -
Acco12g0139 861 Gene3D - 736 859 IPR023214 -
Acco12g0139 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 852 IPR001830 GO:0003824|GO:0005992
Acco12g0139 861 NCBIfam HAD-IIB family hydrolase 606 807 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0139 Acco-ChrAcco12 1215097 1218770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0139 1 861 Trehalose Biosynthesis Gene Families AT1G68020 80.831 0.0 1460
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0139 12 1215097 1218770 Acco12g0139 12 1215097 1218770 ECH