Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0133 ATGAAGTTCAACATTGCTAACCCCACCACGGGGTGCCAGAAGAAGCTTGAAATAGATGATGATGCCACGCTCCGAGCTTTTTTGGACAAGAGGATATCACAAGAAGTCAGTGGAGATGCACTGGGGGAGGAGTTCAAGGGCTATGTTTTCAAAATAACTGGAGGCTGTGACAAGCAGGGTTTTCCCATGAAGCAGGGAGTGCTGACTCCTGGTCGTGTTCGTCTCTTGCTTCACAGAGGAACTCCTTGTTTCCGTGGTTATGGAAGAAGGAATGGAGAGAGGAGAAGGAAGTCTGTTAGGGGTTGCATTGTGAGTCCAGACCTCTCTGTTCTTAACTTGGTTATTGTGAAGAAAGGTGAGAATGATCTTCCAGGATTGACCGACATTGAGAAGCCAAGAATGAGAGGGCCGAAAAGGGCTTCAAAGATTAGGAAGTTGTTTAATCTCTCCAAGGAAGACGATGTGCGCAAATATGTTAACACATACCGCAGAACATTTACAACCAAAACTGGCAAGAAGGTGAGCAAAGCTCCCAAAATTCAGAGGTTGGTTACTCCCTTGACTTTGCAAAGGAAAAGAGCAAGGATTGCTGACAAGAAGAAGAGAATAACCAAGGCCAAGGCTGAGGCTGCTGAATATCAAAAGCTGCTTGCCAGCCGATTGAAGGAACAGCGTGAACGCCGCAGTGAGAGTTTGGCCAAGAGGAGATCTAAGCTCTCTGCTGCATCTAAGCCATCAGTTGCCGCTTAA 750 0.468 MKFNIANPTTGCQKKLEIDDDATLRAFLDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRITKAKAEAAEYQKLLASRLKEQRERRSESLAKRRSKLSAASKPSVAA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0133 249 Coils Coil 189 216 - -
Acco12g0133 249 Gene3D - 133 234 - -
Acco12g0133 249 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Acco12g0133 249 MobiDBLite consensus disorder prediction 219 237 - -
Acco12g0133 249 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Acco12g0133 249 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Acco12g0133 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 240 IPR001377 GO:0003735|GO:0005840|GO:0006412
Acco12g0133 249 MobiDBLite consensus disorder prediction 219 249 - -
Acco12g0133 249 PIRSF RPS6e 1 249 IPR014401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0133 Acco-ChrAcco12 1149621 1151167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0133 1 249 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 70.683 6.46e-118 333