Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0125 ATGGCTCCTAACTTTGTCTTCCTCTGTTTCATCCTCTCCTTCCTCTCCGTAACTCATTTCTCAATTTCCCAGAATACCGTCAATGTCACTTCCTTCAATGCCTCAGATTCCCCATGGCGTCCAAACCAGAATCGCATCCTTCTCTCCCCAAATTTCAATTTCTCTGCGGGCTTCTTCCTCATTTCCTCAGATCGTTACACCTTCTCCGTTTGGTTCACCAACGTCCCGCTTAAAGATGACCCCGTCGTATGGTCTGCAAACTCCAGTTCGTCCCTCACTGCCTCCGCTTCCCTCGTCATCTCCTCCAAAGGCGAGCTTCTTCTCAATAATTCCCGTTTGGCAAAGGCTTCGTCCACTTCCAGCTCCAAGTCGCCTGTTCTCAGTCTCAGTGACGACGGTAAATTAAGTTTTGGAGATTGGAATAGCTTCGCTGACCCAACGGACATCGTTCTCCCGAACCAAGATATCAAAGCAATCGAGCTTCGTTCCAGAGATAAGCGCTTCAGATTCGTCAATTCCACGAGTCTGCAGTTCAATTCCTCCTCGGATTATTACTACACCACCCCAAGCCCGTTGGGGAGCATGGATTCCCTCGGCAAGGTGAATATGACAACTAGCGCTTTTCTCACAAGCGATTACGGCGAAAATCGGCCCCGGAAAATGGTTCTCGGAAATGATGGGAATCTCAAAATCTACAGTTACATCCCCGATCAAAAACCCCCGTGGGTTGAGGTTTGGTTGGCGATTTGGGAACCGTGTAAAATCCAAGGCAAATGCGGTCCTTCTGCTATATGCTTGCCTTCAACTGGAATTAATGATTCGACTTCATGTGTTTGCCCGCCTGGATTCAAGCAAAATCAAGGAGGCCCCCAACAAGGTTGTGTAAGGAAAACCGAACTCACCAATAGCATCAAATTTCTGAAGCTGGATTATGTGAACTATACTAATTCCGATAAGGAACGTATGAAAAATATGGATGCTAGAAACTTCACAATTTGTGAATCTACATGCAGAGCAGACTCACGATGTCTTGGATTTGGCTACAAATATGATGGAACTGGTTTTTGTTCTATGGTGCTGGATGAACTCCAATATGGTTATTGGTCTCCAGGTACCGAGGCTTCGCTGTTTCTTAAGGTAGACAGATCCGAAACCGATACCTCCAATTTCACTGGGATGACAGAAGTTTTGCAGACATCGTGCCCTGTTCGAATCAGTCTCCCACTACCGCCCAAAGATTCGAATTCCACAGCTCGAAACATTGCCATAATCTGCACACTTTTCGCTGCTGAGCTCATTTCCGGCGTCGCTTTCTTCTGGTCTTTCATCAAGAGGTACATCAAGTACAGAGACATGGCTACCACTCTCGGTCTCGAGTTCCTTCCCGCCGGTGGCCCAAAACGGTTCTCCTATGCCGAGCTCAAAACCGCCACGAAGGACTTCTCCAGTCTCATCGGAAGAGGTGGGTTTGGCGATGTTTACAAAGGAGAGCTGCCGGATCATCGCGTTGTCGCCGTCAAGTGCCTCAAGAACGTCACTGGTGGGGACCGCGAGTTCTGGGCAGAGGTCACCATTATTGCCAGAATGCACCACCTCAACTTGGTCCGCTTGTGGGGCTTTTGCACGGAGAAAGGTCAACGAATATTGGTGTACGAGTACATCCCGGGCGGGTCATTGGACAAATACTTGTTTCGTCGACATCGAGCCGGGTCCAAAACGGGGGAAGTATCTCCGGATTCGGACCCAAAGCCTGACCCAAATACGGCCCAAAAGCCCATCCTTGACTGGAATATCCGGTATAGGATAGCCCTAGGTGTGGCAAGATCCATAGCATACTTGCATGAGGAGTGTTTGGAATGGGTCTTACATTGTGACATCAAGCCTGAGAACATCCTACTCGGAGACGATTTCTGTCCAAAGATATCAGATTTCGGATTAGCAAAGCTGAGAAAGAAAGAGGATATGGTAACCATGTCTAGGAGGAGAGGAACTCCGGGTTATATGGCTCCGGAATGGATAACCACGGATCCAATCACGTCCAAAGCTGACGTGTACAGCTTTGGGATGGTGTTGCTGGAGCTGGTGAGTGGGGTCAGGAACTTTGAGATTCAAGGATCATCGGTGAACAGTGAAGAGTGGTATTTTCCTGGGTGGGCTTTTGATAAGATGTTCAAGGAGATGAGGCCTGAAGATATTCTGGACTGTGAGATTAAGCAGCTTTATGATAGTAGGGCCCATTTTAATATGATCAATAGGATGGTGAAGACAGCCATGTGGTGCCTTCAAGATAGGCCCGAGATGAGGCCCACCATGGGCAAAGTGGCTAAAATGTTGGAGGGCACAGTGGAGATTTCTGAGCCCAAGAAGCCCACTGTCTTTTTCCTTGGAGGTGAATAG 2397 0.4831 MAPNFVFLCFILSFLSVTHFSISQNTVNVTSFNASDSPWRPNQNRILLSPNFNFSAGFFLISSDRYTFSVWFTNVPLKDDPVVWSANSSSSLTASASLVISSKGELLLNNSRLAKASSTSSSKSPVLSLSDDGKLSFGDWNSFADPTDIVLPNQDIKAIELRSRDKRFRFVNSTSLQFNSSSDYYYTTPSPLGSMDSLGKVNMTTSAFLTSDYGENRPRKMVLGNDGNLKIYSYIPDQKPPWVEVWLAIWEPCKIQGKCGPSAICLPSTGINDSTSCVCPPGFKQNQGGPQQGCVRKTELTNSIKFLKLDYVNYTNSDKERMKNMDARNFTICESTCRADSRCLGFGYKYDGTGFCSMVLDELQYGYWSPGTEASLFLKVDRSETDTSNFTGMTEVLQTSCPVRISLPLPPKDSNSTARNIAIICTLFAAELISGVAFFWSFIKRYIKYRDMATTLGLEFLPAGGPKRFSYAELKTATKDFSSLIGRGGFGDVYKGELPDHRVVAVKCLKNVTGGDREFWAEVTIIARMHHLNLVRLWGFCTEKGQRILVYEYIPGGSLDKYLFRRHRAGSKTGEVSPDSDPKPDPNTAQKPILDWNIRYRIALGVARSIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITTDPITSKADVYSFGMVLLELVSGVRNFEIQGSSVNSEEWYFPGWAFDKMFKEMRPEDILDCEIKQLYDSRAHFNMINRMVKTAMWCLQDRPEMRPTMGKVAKMLEGTVEISEPKKPTVFFLGGE 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0125 798 Gene3D Phosphorylase Kinase; domain 1 454 553 - -
Acco12g0125 798 MobiDBLite consensus disorder prediction 571 590 - -
Acco12g0125 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 232 IPR036426 -
Acco12g0125 798 ProSiteProfiles Bulb-type lectin domain profile. 32 150 IPR001480 -
Acco12g0125 798 FunFam Serine/threonine-protein kinase 554 789 - -
Acco12g0125 798 SMART blect_4 42 146 IPR001480 -
Acco12g0125 798 Gene3D Transferase(Phosphotransferase) domain 1 555 790 - -
Acco12g0125 798 Pfam S-locus glycoprotein domain 204 286 IPR000858 GO:0048544
Acco12g0125 798 CDD EGF 252 283 - -
Acco12g0125 798 SUPERFAMILY Protein kinase-like (PK-like) 461 779 IPR011009 -
Acco12g0125 798 ProSitePatterns Protein kinases ATP-binding region signature. 485 507 IPR017441 GO:0005524
Acco12g0125 798 SMART serkin_6 479 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0125 798 CDD STKc_IRAK 485 780 - -
Acco12g0125 798 Pfam Protein kinase domain 483 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0125 798 ProSiteProfiles Protein kinase domain profile. 479 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0125 798 FunFam S-receptor-like serine/threonine-protein kinase 451 553 - -
Acco12g0125 798 PIRSF SRK 1 798 IPR024171 GO:0004674
Acco12g0125 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Acco12g0125 798 Gene3D - 38 145 IPR036426 -
Acco12g0125 798 PANTHER OS07G0415500 PROTEIN 7 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0125 Acco-ChrAcco12 1100363 1102759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0125 322 790 Receptor kinase-like Gene Family AT4G18250 33.470 1.13e-76 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco12g0125 Pkinase 1.6e-45 CL0016