Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0116 ATGGGGAAGAAGAAGAAGAGGGTTTCTTCGAAGGTCTGGTGCTACTATTGCGATCGGGAGTTCGACGACGAAAAGATTTTGGTTCAGCATCAGAAGGCTAAGCACTTCAAATGCCATGTCTGTCACAAGAAACTCTCCACTGCTGGCGGCATGGCCATTCACGTGCTACAGGTTCATAAAGAAAGCGTCACCAAGGTGCCCAATGCAAAACCTGGTAGAGAGTCAACTGATATTGAAATATACGGAATGCAAGGGATTCCACCAGACATATTGGCCGCCCATTATGGAGATGAAGAGGATGAAGCTCCATCAAAGACAGCCAAAGTGGATATCCCATCAAGTCAGCTTGTGGGTGGAGCTGTCCCAGCACCATTAGGCATGGGATATCCTCCTCAGTCAACCTTGGGTACTATGCCACCTATTTATAATCCTACAGTACCTGTGCCTCCTTCCACTTGGCCGGTTCCACCTCGTCCTCAGCCTTGGTATCTGCAACCTCCATCTGTTTCCATTCCTCCTCCTGCCCCATATGTACAGCAGCCGTTGTTTCCTGTTCAGAATGTGAGGCCACCTCTACCATCAACTGCCTCTCCTGCCCTTCCAACTTCTCAAGTTGCCCCTCCTGGGTTACCTCCGACATCTGCCCCAGTTTCACAACCATTGTTTCCTGTTGTTGGAAATAACCATACAGTGGCCCAAAGCTCAACATTTTCTACCCCATCACTTTCTAGCAGTGTCCCGTCTGCATTGTCTGCAAGTGTCCCTACTGATGCTTATTCAAGTGCCAACACAACTTTGACAAATAATTATCAAGCACTAGGAGTTGCAGGCAACTCGCATTCTTATGCTTCCGGTCCTAATACTGGTGGTCCTTCAATTGGACCACCCCCAGTAATTGCAAACAAAGCTCCTGCAACTCAACCTGCCACTAATGAGGTCTATTTAGTCTGGGATGATGAGGCGATGTCCATGGAGGAAAGAAGAATGTCCTTGCCAAAATACCAGGTGCATGATGAAACTAGCCAGATGAGTTCTATTGACGCAGCCATAGACAAGAGGATACTTGAAAGCAGGCTAGCAGGTCGAATGGCTTTTTAG 1098 0.48 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGDEEDEAPSKTAKVDIPSSQLVGGAVPAPLGMGYPPQSTLGTMPPIYNPTVPVPPSTWPVPPRPQPWYLQPPSVSIPPPAPYVQQPLFPVQNVRPPLPSTASPALPTSQVAPPGLPPTSAPVSQPLFPVVGNNHTVAQSSTFSTPSLSSSVPSALSASVPTDAYSSANTTLTNNYQALGVAGNSHSYASGPNTGGPSIGPPPVIANKAPATQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDETSQMSSIDAAIDKRILESRLAGRMAF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0116 365 MobiDBLite consensus disorder prediction 281 305 - -
Acco12g0116 365 PANTHER ZINC FINGER PROTEIN 207 1 365 - -
Acco12g0116 365 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Acco12g0116 365 SMART c2h2final6 12 35 IPR013087 -
Acco12g0116 365 SMART c2h2final6 36 59 IPR013087 -
Acco12g0116 365 MobiDBLite consensus disorder prediction 189 212 - -
Acco12g0116 365 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Acco12g0116 365 CDD SUF4-like 13 92 - -
Acco12g0116 365 Gene3D Classic Zinc Finger 1 66 - -
Acco12g0116 365 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0116 1 345 C2H2 Transcription Factor Family AT1G30970 64.986 6.22e-142 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco12g0116 None None None