Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0113 ATGATGACACCAAATTTGAACTTGGAACCCGAAAATTATTCAGAAGTCAGTAGCCAAGGAGCTTCCAATATATCCTTGCAGGAAACCTCCCATGACCTTGCCAAGGACAGCAACACCACTTCTTCCTGTCTTACAAACCTCACAAAACCTGAAACCGACCCAGTGTCGTTCTCCCTTGACTTAACACTCAACTTCAACTCCAGTGATGGCGAGTTGAAGCGCGCAAGTGATGCCAGCAGTGAAGTAGGAGCTGAAGCACAACCTTCAGGATCAGCAATTCCCAGGGTCTTCTCTTGTAATTACTGTAGGAGAAAGTTCTTCAGTTCTCAGGCATTGGGAGGCCATCAAAATGCTCATAAAAGGGAGAGAACAATGGCAAAGCGAGCGATGCGAATGGGAATGTTCACCGAGCGGTATACAAGCCTGGCATCTTTGCCTCTTCATGGTTCTGCTTTTCGGTCTCTCGGTGTTGAAGCTCATGCTGCCATGCACCAAAGGCACATGCCATCACTGAGGGCTCCTAACTTAAGAGCTGGTGCAAAATTTGAGAAAGATTATTTTGGACCAACCATGTTCATGGAAGATGAAGATAATATGGGTCTATTTTGGCCTGGAAGTTTTCGGCAGGTGGAAGGCAGAGCCGGTGTTAGCATTGGACATGAACACGATCCAAATTCAACTACTAGTTTTGTAACAACTGCGCCGCCACCGCGGCCACTACCACCACCGTCTCAACCACAAACATCCACATCTCCTGATCTCACTCTGAAGCTCTAA 777 0.4723 MMTPNLNLEPENYSEVSSQGASNISLQETSHDLAKDSNTTSSCLTNLTKPETDPVSFSLDLTLNFNSSDGELKRASDASSEVGAEAQPSGSAIPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSAFRSLGVEAHAAMHQRHMPSLRAPNLRAGAKFEKDYFGPTMFMEDEDNMGLFWPGSFRQVEGRAGVSIGHEHDPNSTTSFVTTAPPPRPLPPPSQPQTSTSPDLTLKL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0113 258 Gene3D Classic Zinc Finger 85 144 - -
Acco12g0113 258 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Acco12g0113 258 MobiDBLite consensus disorder prediction 1 47 - -
Acco12g0113 258 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Acco12g0113 258 MobiDBLite consensus disorder prediction 234 248 - -
Acco12g0113 258 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
Acco12g0113 258 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 174 IPR044246 GO:0009788
Acco12g0113 258 FunFam Zinc finger protein 2 73 143 - -
Acco12g0113 258 MobiDBLite consensus disorder prediction 217 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0113 Acco-ChrAcco12 967772 968548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0113 91 258 C2H2 Transcription Factor Family AT1G66140 42.932 2.53e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco12g0113 None None None