Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0111 ATGATTGGAGGAAAAGATCTCCCTAATGGTCTTGACTCTGATGGGGAGAACTCTCGAAGCAAGCTGTCGAAGCCCAATTTTGACCGTGGCAGGGAGAACCCTGAAGAGAAATTAGGTTACCCTGCAAAGGGTGCGTATTTCCTGAAGAATTCAGAGGACGTTGGTGATGGAATTCTATTGAAACCCTCTAAAGTTGGGGCTTCGTGCTTACAAGAGCTGACACTCAGCTATCTTTGTAGTAAGGAGATTCCTGGTAAAAGTTTGCTGAATTCCTTGGAAAGAGTCAGTGGCAAAGGTAAAGAAGTCATCGTCTCGGAGGATTCATATCAGGGTGGAAAATGGATCGAACGGGATTTTCTGAATTTGAGCGAAAGCAGGGAGAATTCTTCAAAGCGATCGGTTGAAGAAGACGTTGAAAGGGAAAATAAGGACAAGAAGCCGAAGCTGGAGACGCTTAATCTCTCTCTTGCCTTGCCTGATGTCTCCCTTTCTCTTACGGCGTCAAACGCCCTGCAAAACGGTGATCAGCCGGTGAGGCCAAAACCTAGCAAACCGTCAGCGACTACGTATTCAAATGATTATACAGCGGCTTCTCTATCATACTCGTATTCCCATCCCTTCTCACACAATCCAAGTTGCTCGCTTACCCGTAATTCTACAGATTTTGATTATTCCATTAGCAAAGATGATCATATTTGGAACTGCGGAGAGGGGACGAATGGGTCAGTTCATAGTCGGTTCAAGCCGATAGGAGATGGGGTTGCCTTGTCTAATCATGGTGGTGGTGGTTTTAATTCGATCATGCAGGGTAATAATAGTCAGTATAAAACTACAAGTTCAGATAACCATTCTTTTTTTCCGTCAGAATTGCCTGCCAGGCCAAGATTTGAAGATCGGTCGGGGGACTCGAGAGGAAGGAATTCTGAGAATCTGAGAAGTGAGAAAGTAAGGAAGCTTTCTAGACCAGAGAAAATTCTCAGAGAGATCGTGTTGGAGTCTACCCCAACCATGGCTGCTCAGTTTCAAGAGCTTACGGATGAAGCGATTGCATCGACTAAAGAGTACTTAAAGAATCTCATTGAGATACCCGAGAAGAAAGAGGAATTGGCCAGCCTCCAAAATCGGCTTGAGCGAAGATCTGACCTTACTAAGGAGACTCTTTCGAAGTGCCAAAAGGGCCAACTTGAGATTCTAGTTTCTGTCAAGATGGGGCTTGCAAGCTTCTTATCTGGCAAAGTCCCCTTCTCTGATATGGTAGAGATTTTCTTGCATATGAGATGTAGGAATGTGAATTGTAGGAACTTGCTCCCTGTTGATGACTGTGACTGCAATATTTGTTCTGGAAATAAGGGATTTTGTAGTTCTTGCATGTGTCCTGTGTGTCTGAACTTTGACTGTGCTAGCAACACATGCAGTTGGGTTGGTTGTGATGTCTGTTCCCACTGGTGCCATGCTGCCTGCGGCATTAAGAGGAATCTTATCAAACCTGGGCCTAGCTTAAAGGGACCATCAGGGACCACTGAGATGCAGTTTCATTGCAGTGGATGTGGACATGCTTCAGAAATGTTTGGCTTTGTTAGAGACGTGTTCATGTGTTGTGCGAAGGATTGGGGTCTAGAAACCCTGGTGAAAGAGCTTGACTGTGTAAGGAGGATTTTCAAAGAAAGTGAAGATCGCAAAGGAAAGGAATTGCATGTCAAAACTGATGACATGTTCTATAAGCTGCAAACTAAAACAGTGTCTCCTTTGGATGCCTGCAATTACATCCTACAATTTTTCAACTATGCAGATAGCATGTCAGACTTTCCTGCTTCTGGTATGTCTTCAAAGGATTTGTCAGCATCTCAAGCCAATATTAGAAAGGAAGCAACATCTCTTTCACAATCTAATTCTCTAATGTCAAAATATACTTATAACTCGAGCTATTCTTCAAGGTCACAATGTGATGTCCTATCAAATGATCTTCATCAGAAAGATCTGAAAGCCTCCATCTTAAGTGAATTGAAAAATGAGAGTGATTTCCAGCTGGGGGCTCTGATAAGAAAAGGTGGGCTTGATAACTTGGAGAGCATTGTGAGGATTAAGGAAGCAGAAGCCAGAATGTTCCAAACCAAGGCCGACGAAGCCCGGAGAGAAGCGGAAGGGTTCCAGAGGATGATAAAGATGAAAACGACGCAGATGGAAGAAGAGTACACTGAGAGGCTTGCCAAGCTCTCTCTTCCAGAGACTGAGGAAACTCGGAGGAAGAAATTGGAGGAATTGAAGGTCTTAGAAAATTCCCAGTGTGATTACTTTAAAATGAAAATGAGGATGCAAGCTGAGATTGCTGGTTTGTTGGAGAGAATGGAGGCAACAAAGCAGCAATGGGTTTAA 2373 0.4383 MIGGKDLPNGLDSDGENSRSKLSKPNFDRGRENPEEKLGYPAKGAYFLKNSEDVGDGILLKPSKVGASCLQELTLSYLCSKEIPGKSLLNSLERVSGKGKEVIVSEDSYQGGKWIERDFLNLSESRENSSKRSVEEDVERENKDKKPKLETLNLSLALPDVSLSLTASNALQNGDQPVRPKPSKPSATTYSNDYTAASLSYSYSHPFSHNPSCSLTRNSTDFDYSISKDDHIWNCGEGTNGSVHSRFKPIGDGVALSNHGGGGFNSIMQGNNSQYKTTSSDNHSFFPSELPARPRFEDRSGDSRGRNSENLRSEKVRKLSRPEKILREIVLESTPTMAAQFQELTDEAIASTKEYLKNLIEIPEKKEELASLQNRLERRSDLTKETLSKCQKGQLEILVSVKMGLASFLSGKVPFSDMVEIFLHMRCRNVNCRNLLPVDDCDCNICSGNKGFCSSCMCPVCLNFDCASNTCSWVGCDVCSHWCHAACGIKRNLIKPGPSLKGPSGTTEMQFHCSGCGHASEMFGFVRDVFMCCAKDWGLETLVKELDCVRRIFKESEDRKGKELHVKTDDMFYKLQTKTVSPLDACNYILQFFNYADSMSDFPASGMSSKDLSASQANIRKEATSLSQSNSLMSKYTYNSSYSSRSQCDVLSNDLHQKDLKASILSELKNESDFQLGALIRKGGLDNLESIVRIKEAEARMFQTKADEARREAEGFQRMIKMKTTQMEEEYTERLAKLSLPETEETRRKKLEELKVLENSQCDYFKMKMRMQAEIAGLLERMEATKQQWV 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0111 790 Coils Coil 692 712 - -
Acco12g0111 790 MobiDBLite consensus disorder prediction 292 317 - -
Acco12g0111 790 MobiDBLite consensus disorder prediction 17 38 - -
Acco12g0111 790 MobiDBLite consensus disorder prediction 265 286 - -
Acco12g0111 790 Coils Coil 740 760 - -
Acco12g0111 790 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 340 362 IPR004082 -
Acco12g0111 790 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 418 439 IPR004082 -
Acco12g0111 790 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 379 394 IPR004082 -
Acco12g0111 790 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 464 484 IPR004082 -
Acco12g0111 790 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 686 706 IPR004082 -
Acco12g0111 790 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 725 747 IPR004082 -
Acco12g0111 790 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 537 556 IPR004082 -
Acco12g0111 790 Coils Coil 768 788 - -
Acco12g0111 790 MobiDBLite consensus disorder prediction 125 146 - -
Acco12g0111 790 Pfam Coiled-coil region of Oberon 651 779 IPR032535 -
Acco12g0111 790 Pfam PHD - plant homeodomain finger protein 427 551 IPR032881 -
Acco12g0111 790 MobiDBLite consensus disorder prediction 169 191 - -
Acco12g0111 790 CDD PHD_OBE1_like 457 516 IPR047578 -
Acco12g0111 790 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 127 789 IPR004082 -
Acco12g0111 790 MobiDBLite consensus disorder prediction 265 317 - -
Acco12g0111 790 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0111 Acco-ChrAcco12 952915 956477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0111 358 527 PHD Gene Family AT5G57380 24.365 5.16e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0111 12 952915 956477 Acco12g0111 12 952915 956477 ECH