Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0086 ATGGGCTTGAAAGAGGCTAAGGTTGGCCTTGTTTTTGTTGGTCATATTAAAATGCATTACCAACTATAACACCTTCCCTCTTCTCTCTTTCTCTCTCACTTTGACATTCCTGGCTTCCTCCTCTCTCCTCTCTCCTCTCTCCTCCCCTTCTCTCTCTCTCTCTCTTTCTCTCTCTTTCAGGTCTCTCTCTCCTCTCTCCAGAAGGGCAAAACCCTAAAGAGCCGTTTACACCCACCAATTCTCATGGACGATGATGCTTTGATGCGCAATTGGGGTTATTATGAACCATTCAAAGGGGGGCATCTGGGTCTCCAGCTCATGTCTAGTATGACAGAACGAGACACTAAACCATTTATGCCTGGCCGTGATCCTGCTATGTTAGTTAGTCCAAATGGAAGCTTCCACCCCCGGGATTGTGTTGTTACAGAAGCCCCAATTCCAATTAACTATGTTAGAGACAGTTATATTAGCCAGAGAGATAGGTTTCTCAATATGTTGCCCACAAATCCTAATTATGCCGTTCTTCCAGAAACATCAGCAGCTCCTTCCTTGCAAATTAGACAGCCACCTGAAACATCGAGAGATGATAGGCTGAATCAAGTTGAAGACCCTCCTGTCAAAAAGGAAGTTGGCCAATTGAAGAAAAGGCAAAGTGGGGGCGCTCCGCAAGCTCCTAAAGCGAAAAAACCAAGGAAGCCAAAGGATAATAGCAATGCTGTGGTTCAACGTGAGAAGCCAGCTAGGAAGGCTATGGAGGTTGTGATAAATGGAATTGATATGGACATTTCTGGTCTACCAATTCCTGTTTGCTCATGCACTGGGACTCCTCAGCAGTGTTATCGATGGGGCTGTGGTGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCCATGTATCCATTGCCGATGAGCACTAAAAGGCGTGGCGCAAGGATAGCTGGACGGAAAATGAGTCAAGGTGCTTTCAAGAAGGTTTTGGAAAAACTTGCAGCTGAAGGATATAATTTTGGCAATCCTATTGATCTGAGGACTCACTGGGCTAGGCATGGGACCAACAAGTTTGTCACTATCAGGTAA 1077 0.4559 MGLKEAKVGLVFVGHIKMHYQLXHLPSSLFLSHFDIPGFLLSPLSSLLPFSLSLSFSLFQVSLSSLQKGKTLKSRLHPPILMDDDALMRNWGYYEPFKGGHLGLQLMSSMTERDTKPFMPGRDPAMLVSPNGSFHPRDCVVTEAPIPINYVRDSYISQRDRFLNMLPTNPNYAVLPETSAAPSLQIRQPPETSRDDRLNQVEDPPVKKEVGQLKKRQSGGAPQAPKAKKPRKPKDNSNAVVQREKPARKAMEVVINGIDMDISGLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFGNPIDLRTHWARHGTNKFVTIR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0086 358 MobiDBLite consensus disorder prediction 167 189 - -
Acco12g0086 358 Pfam GAGA binding protein-like family 82 358 IPR010409 -
Acco12g0086 358 SMART GAGA_bind_2 82 358 IPR010409 -
Acco12g0086 358 MobiDBLite consensus disorder prediction 228 246 - -
Acco12g0086 358 MobiDBLite consensus disorder prediction 190 214 - -
Acco12g0086 358 PANTHER - 82 358 IPR010409 -
Acco12g0086 358 MobiDBLite consensus disorder prediction 167 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0086 Acco-ChrAcco12 752676 754598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0086 82 358 BBR or BPC Transcription factor family AT2G01930 58.446 5.85e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Acco12g0086 GAGA_bind 3.2e-108 No_clan