Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0055 ATGATTTGCCTCAATGAAACACACATAAACCCTATCGATCGCCATCCTACACTCTTCGCTGCGCCTACTATCGTCTTCCTCGCTTCTGATATCGCCCACGAGCAGAGGTCGACGCTGCTTCATCGTCATCGTGTTAGAGAATCTGTGGCGAGATCACATTCAGGAATCTTTTCGTTTCCATCAATGGTTGGAAGTCTTGAAATCGAAGCTGTACCTTTCAATCCAGATGGATGGGGTCCGCCTGACGCCGCCGCGTCTTCCGCCAGCAACCTCCCGGTGAATATACCCTACGCCCCATTCTCTCGTTCAGACAAACTGGGTCGAATCGCTGACTGGACCCGCAACTTCAACAACCCTGCACGACCCAGGAACCCGGCTGACGCTGCATTCGACTTCACCATCGACGATTCCTTCCCTGCCTCCGCTGATGATGATTCTTCCTTCCGCCTCGTCGATGGAAAGCCCCCTCCGCGACCCAAGTTTGGTCCCAAATGGCGGTTCCAGCAGCAGCGGCAGCTCCCTCAACGCCGTGACGAGGAGGTGGAGGCCCGAAAACGTGAGGCTGAGAAGGAGAGGGCGCGCCGCGACCGTCTCTACCATCTCAATAGATCCAACGCGAATGCCTCACGTCGTGAAGCCGCGGTCTTCAAATCCTCTGTGGATATTCAGCCCGAGTGGAACATGCTGGACCAGATCCCATTTTCAACTTTTTCGAAGTTATCTTTTGCTGTTCCTGAACCCGAAGATCTTCTTCTCTGTGGAGGGCTTGAATATTATGACAGGTCATATGATAGGATTACTCCCAAGAACGATCGTCGTCTCGAGAGGTTTAAGAATAGGAACTTTTTCAAAGTTACTACCACTGACGACCCAGTGATCCGAAGGCTTGCTAACGAGGACAAAGCCACAGTTTTTGCCACTGATACGATTCTTTCAACGCTCATGTGTGCACCCAGGTCTGTTTACTCATGGGATATTGTTATTCAGCGAGTTGGGAATAAGTTGTTTTTTGATAAGAGGGATGGATCGCAGTTGGATTTGCTGTCCGTCCACGAAACCTCGCAGGAGCCATTGCCTGAGGCCAAGGATGATATTAACTCAGCCCATTCATTGAGCGTCGAGGCAGCTTATATTAATCAGAATTTCTCGCAACAAGTTTTAATTAGGGATGGGAATAAGTTGACTTTTGACGAGCCTAATCCTTTTGCAAATGAGGGTGAGGAGGTTGCTTCTGTGGCATACAGGTATAGGAGGTGGAAGCTTGATGATGATATGCATCTTGTTGCAAGGTGTGAAGTTCAGAGTGTTGTTGACATGAACAATCAGAGGTCCTTTCTTACATTGAATGCTTTGAATGAATTTGATACCAAATACTCTGGTGTTGACTGGAGACAGAAGTTGGAGACACAAAGGGGTGCAGTCTTGGCAACAGAGCTGAAGAATAACGCAAATAAGTTGGCTAAATGGACTGCCCAAGCTCTGTTGGCTAGTGCAGATATGATGAAGTTGGGTTACGTTTCTAGGGTTCATCCTCGTGATCATTTTAATCATGTGATTTTGTCTGTAAATGGTTATAAACCCAGAGACTTTGCAACTCAAATTAATTTGAATACAAATAATATGTGGGGAATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAACGAGGGTAAGTATGTTTTAGTGAAGGATCCATCTAAGCCCCAGGTTAGGATCTATGAGGTTCCAGCTGATGCATTTGAGAATGACTATGTGGAGGAGCCACTGCCTGAGGAGGAACAAGCTCAGCCTCCAACTGAGGGTGGTGATGGTGGTGAGGCAACTGCTACAACTAATGATGTGGAAGATAAGCAGATTGGTGATCAAGCTTAA 1875 0.4747 MICLNETHINPIDRHPTLFAAPTIVFLASDIAHEQRSTLLHRHRVRESVARSHSGIFSFPSMVGSLEIEAVPFNPDGWGPPDAAASSASNLPVNIPYAPFSRSDKLGRIADWTRNFNNPARPRNPADAAFDFTIDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNANASRREAAVFKSSVDIQPEWNMLDQIPFSTFSKLSFAVPEPEDLLLCGGLEYYDRSYDRITPKNDRRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKLTFDEPNPFANEGEEVASVAYRYRRWKLDDDMHLVARCEVQSVVDMNNQRSFLTLNALNEFDTKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILSVNGYKPRDFATQINLNTNNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQAQPPTEGGDGGEATATTNDVEDKQIGDQA 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0055 624 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 69 575 IPR007783 GO:0003743|GO:0005737|GO:0005852
Acco12g0055 624 MobiDBLite consensus disorder prediction 171 193 - -
Acco12g0055 624 Coils Coil 176 196 - -
Acco12g0055 624 MobiDBLite consensus disorder prediction 143 193 - -
Acco12g0055 624 PIRSF Transl_init_eIF3d 61 604 IPR007783 GO:0003743|GO:0005737|GO:0005852
Acco12g0055 624 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 64 587 IPR007783 GO:0003743|GO:0005737|GO:0005852
Acco12g0055 624 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 65 598 IPR007783 GO:0003743|GO:0005737|GO:0005852
Acco12g0055 624 MobiDBLite consensus disorder prediction 584 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0055 Acco-ChrAcco12 543008 545462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0055 65 622 Eukaryotic Initiation Factors Gene Family AT4G20980 78.425 0.0 924