Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0049 ATGTCTCAGATATCTGGGCTACTCCCTGCTTTCCAGTCTCTCGAAGCGTTGCAACCTAGTGCCAAGTTCACAGCTGATCCAGCACTTGCTTTTGTGGAAAAACAGGAAAACGGTGCACTAGGAAGGGAGGTCTCTGAGGAAGTTCAAGACCCTGCTGTTGATATGGATCTTTTTGATGAGGATTCGCCATATGGTGGAAGAACTACATCGTTAGAAAGCAGGCCTTCAGCTGGTGATGATGGCACAGATTCTGCTCCTCAGCCACTCCCCTCAATCTCCCCATCGTCCAGTGATCACTGGTGGAGTGATACAACACCTTATGTTTCAAAGAAGAAGATTCATTCTTGGTTTCAACTTCCAAATGGGAATTGGGAGCTGGGGAAGATAATATCCACATCAGGGATGGAATCTGTTATCACATTGCCTGATGGGAAAGTTTTAAAGGTTAAAGCTGAAGGTTTGGTTCCAGCAAACCCTGATATTCTTGATGGAGTGGATGACCTTATGCAGCTTAGTTATTTGAATGAACCATCAGTGTTATACAACCTGCAATATAGATACAACCGAAATATGATTTACACAAAAGCAGGGCCCGTTTTGGTTGCAATAAACCCATTTAAGAAAGTCCCTCTGTATGGAAATGATTATATTAAAGCATACAAGAATAAAGTTATGGAAAGCCCTCATGTATATGCCATTACAGACACAGCCATCCGGGAAATGATAAGAGATGAAGTGAATCAATCTATAATTATAAGTGGTGAAAGTGGAGCAGGCAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGAGGTGGAAGTGGAATAGAGTATGAGATACTGAAGACTAATCCAATTCTAGAGGCCTTTGGCAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGGAAACTTATTGAGATCCACTTCAGTGAAACCGGAAAAATATCGGGTGCTAATGTTCAGACATGTAAGTTTACTGCTGTATTTGTGGTTAAAACACTATCTCTGATTCCGTTTGAAGTTTTGCTAGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATACCATATTTTCTATCAGCTGTGCGCTGGGGCACCGCTTTCTCTGAGGGAGAAACTAAATCTACAAAATGTGGAAGAATACAAATATCTGAGGCAGAGCAATTGTTTTTCCATTACTGGCGTTAATGATGCGGAAGAATTTCGCACAGTCTTGGAAGCCTTGGATGTTTTTCATATCAGCAAAGAAAATCAGGAGAATGTATTTGCAATGCTTGCTGCAGTGTTATGGCTAGGGAACATATCATTTACTGTGTTTGATAATGAAAATCATGTTCAACCCGTAGAAGATGAGGGTTTGTTCAACGTTGCTAAATTGATTGGCTGTGACATTGAGGATCTGAAGTTGACTTTATCGACTCGCAAAATGAAAGTTGGTAACGACATCATTGTCCAAAAGTTGACACTATCTCAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCTTCTCTGTTTGATTGGCTGGTTGAACAAATAAACAATTCACTAGCTGTTGGTAAAAGACGCACTGGTAGATCAATCAGTATTTTAGACATCTATGGATTTGAATCTTTTGAGAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCTAATGAGAGATTGCAGCAACACTTCAACCGTCACTTGTTCAAGTTAGAACAAGAGGAATATATACAGGATGGCATTGACTGGACTAAAGTTGAATTTGAAGACAACCAAGATTGCCTTAATCTTTTTGAAAAGAAGCCGCTGGGGTTACTATCCCTTTTAGATGAGGAGTCCACTTTCCCAAATGGTACAGATTTGACTTTCGCTAACAAGCTTAGACAGCATCTGAATTCAAATTCATGTTTCCAAGGAGAACGAGGCAAAGCCTTTGCTGTGCGTCATTATGCAGGGGAGGTCACCTATGATACAACCGGATTTTTGGAGAAGAACAGGGACCTATTGCACTTGGATTCCATTCAACTTTTATCCTCATGCACATGCCATCTTCCTAAGCAATTTGCAGCCCATATGCTTTTGCAATCTGAGAAGCCTGTAGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGTTAAGTGTGGCCACAAAGTTCAAGGGTCAACTGTTTCAACTGATGCAACGTTTGGAGAGCACCACACCACATTTTATTCGATGCATTAAGCCTAATAACTTCCAGTCACCAGGATCATATGAGCAAGGGCTTGTTCTCCAGCAACTGAGATGTTGTGGAGTCCTGGAAGTGGTTCGAATATCAAGATCTGGTTTTCCTACTAGAATGTCTCATCAAAAGTTTGCTAGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAGGAGCCACTCAGTGTTTCAGTTGCAATTCTACATCAGTTTAGTATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGACAGATTGGAGTGCTTGAAGATACTAGAAATCGTACCCTCCATGGTATCTTACGTTTCCAAAGTTGCTTCAGGGGTCACCAAGCACGCTGTTATAACAGGGAGCTTAGGAGAGGAATCACTACTCTCCAGTCATTTATTAGGGGAGAGAAAACAAGAAAGGAATATGCAGCTTCACTTCGGCGACATAGAGCTGCTGTTGTTATACAGAAGCAGATGAAAGCAGTGTTTGCCAGGAGAAGAATGAAGAATATTTGTGATGCTTCAATAGTCATTCAATCAGCTATTCGTGGTTCATTGGCCAGAAGATGCTCAGGAGATATGGGATTGTTGAAATCTATAGGGATGAAGACGAACGAGTCAGACGAAGTGCTAGTCAAGACTTCTTTTCTGACTGAATTACAGCGTCGGGTACTCAAGGCTGAAGCTGCTCTGAGAGTGAAGAAAGAGGAAAATGACATTCTTCACCAACGTCTCCACCAGTATGAGAGCCGTTGGTCTGAGTATGAATCAAAGATGAAATCAATGGAAGAAGGGTGGCAGAAACAAATGAGATCACTACAATCTAGCCTCTCCATTGCAAAAAAGAGCTTAGCAATTGATGATTCTGCAAGAAATTCGGATGCTTCTGTAAATGCAAGTGATGATAGAGATTATAGTTCTGATATAGGAAGCCATCATAGGCGCCAAGAAAGCAGCTCAAGTGTAGGAAACTATCACAGACGCCAAGAAAGCAATGGGTTTAGACCAGTGGGTGCAGGTTTGAACGTCATAAGTGGGTTGAGTCATGAATTGGATCAGAGGCGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTCGAGGTGAAATCTGGTCAAGTTGAGGCAAATTTGAATCCAGACCAGGAGCTTAGAAGGTTGAAACACACGTTTGAAGCTTGGAAGAAAGATTATGCCGCAAGACTACGTGAAACAAAAGCAATTTTACATAAGCTTGGGAGTGAAGAAGGTGCAATGGACAAAGTGAAGAAAAGGTGGTGGGGAAGAAGGAATAGTACGAAGTTTGGTTGA 3576 0.4144 MSQISGLLPAFQSLEALQPSAKFTADPALAFVEKQENGALGREVSEEVQDPAVDMDLFDEDSPYGGRTTSLESRPSAGDDGTDSAPQPLPSISPSSSDHWWSDTTPYVSKKKIHSWFQLPNGNWELGKIISTSGMESVITLPDGKVLKVKAEGLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNRNMIYTKAGPVLVAINPFKKVPLYGNDYIKAYKNKVMESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANVQTCKFTAVFVVKTLSLIPFEVLLEKSRVVQCNEGERSYHIFYQLCAGAPLSLREKLNLQNVEEYKYLRQSNCFSITGVNDAEEFRTVLEALDVFHISKENQENVFAMLAAVLWLGNISFTVFDNENHVQPVEDEGLFNVAKLIGCDIEDLKLTLSTRKMKVGNDIIVQKLTLSQAIDARDALAKSIYASLFDWLVEQINNSLAVGKRRTGRSISILDIYGFESFERNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLRQHLNSNSCFQGERGKAFAVRHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCHLPKQFAAHMLLQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQEPLSVSVAILHQFSILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRFQSCFRGHQARCYNRELRRGITTLQSFIRGEKTRKEYAASLRRHRAAVVIQKQMKAVFARRRMKNICDASIVIQSAIRGSLARRCSGDMGLLKSIGMKTNESDEVLVKTSFLTELQRRVLKAEAALRVKKEENDILHQRLHQYESRWSEYESKMKSMEEGWQKQMRSLQSSLSIAKKSLAIDDSARNSDASVNASDDRDYSSDIGSHHRRQESSSSVGNYHRRQESNGFRPVGAGLNVISGLSHELDQRRQVFGDDAKFLVEVKSGQVEANLNPDQELRRLKHTFEAWKKDYAARLRETKAILHKLGSEEGAMDKVKKRWWGRRNSTKFG 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0049 1191 CDD MYSc_Myo8 177 841 IPR036022 -
Acco12g0049 1191 Pfam IQ calmodulin-binding motif 859 874 IPR000048 GO:0005515
Acco12g0049 1191 Pfam IQ calmodulin-binding motif 930 945 IPR000048 GO:0005515
Acco12g0049 1191 Pfam IQ calmodulin-binding motif 879 898 IPR000048 GO:0005515
Acco12g0049 1191 Gene3D - 549 743 - -
Acco12g0049 1191 Gene3D Myosin VI head, motor domain, U50 subdomain 424 721 - -
Acco12g0049 1191 MobiDBLite consensus disorder prediction 86 100 - -
Acco12g0049 1191 ProSiteProfiles Myosin motor domain profile. 163 853 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco12g0049 1191 ProSiteProfiles IQ motif profile. 878 907 IPR000048 GO:0005515
Acco12g0049 1191 FunFam Unconventional myosin-XIX 551 743 - -
Acco12g0049 1191 FunFam Myosin heavy chain 363 419 - -
Acco12g0049 1191 Gene3D Kinesin motor domain 166 782 IPR036961 -
Acco12g0049 1191 Gene3D - 363 422 - -
Acco12g0049 1191 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 110 159 IPR004009 GO:0003774|GO:0005524|GO:0016459
Acco12g0049 1191 Coils Coil 973 1007 - -
Acco12g0049 1191 SMART MYSc_2a 157 854 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco12g0049 1191 ProSiteProfiles IQ motif profile. 929 955 IPR000048 GO:0005515
Acco12g0049 1191 MobiDBLite consensus disorder prediction 36 100 - -
Acco12g0049 1191 PRINTS Myosin heavy chain signature 592 620 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco12g0049 1191 PRINTS Myosin heavy chain signature 539 567 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco12g0049 1191 PRINTS Myosin heavy chain signature 289 316 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco12g0049 1191 PRINTS Myosin heavy chain signature 247 272 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco12g0049 1191 PRINTS Myosin heavy chain signature 193 212 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco12g0049 1191 SMART iq_5 926 948 IPR000048 GO:0005515
Acco12g0049 1191 SMART iq_5 877 899 IPR000048 GO:0005515
Acco12g0049 1191 SMART iq_5 854 876 IPR000048 GO:0005515
Acco12g0049 1191 SMART iq_5 903 925 IPR000048 GO:0005515
Acco12g0049 1191 PANTHER MYOSIN 156 1183 - -
Acco12g0049 1191 Gene3D - 786 854 - -
Acco12g0049 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 899 IPR027417 -
Acco12g0049 1191 Gene3D - 906 949 - -
Acco12g0049 1191 Gene3D - 858 905 - -
Acco12g0049 1191 Pfam Myosin head (motor domain) 165 841 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco12g0049 1191 MobiDBLite consensus disorder prediction 1046 1090 - -
Acco12g0049 1191 MobiDBLite consensus disorder prediction 1061 1077 - -
Acco12g0049 1191 MobiDBLite consensus disorder prediction 1046 1060 - -
Acco12g0049 1191 ProSiteProfiles IQ motif profile. 857 884 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0049 Acco-ChrAcco12 493360 503466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0049 10 1190 Myosins gene family AT1G50360 73.463 0.0 1757