Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0017 ATGGCATCGCCGCCGGTAAGCACCGACTATATGGACAAAGCAGACAATGCGTGGCAGCTGACTGCGGCAACACTAGTAGGGATGCAAAGTGTGCCCGGGCTCATCATCTTATACGGAGGGGCGGTGAAGAAGAAATGGGCAGTGAATTCAGCGTTCATGTCGCTCTATGCTTTTGCGTGCGTGTTCGTGTGTTGGGTGATGTGGGGCTACAGATTGTCGTTTGGGGACAAGCTTGCTCCGTTCTGGGGAAAGCCCGCCTTGTCACTGGACGAGGCCTACCTACTCAAGGAGGCTTTTCTGGGATTGTTCCCAAACGCCACCATGGTATACTTCCAGGGCGTATTTGCCTGCATCACTTTGATTTTGATCGCAGGGGCGTTGTTGGGGCGCATGAACTTCTACGCTTGGATGCTGTTCGTGCCTCTCTGGCTCACATTCTCCTACACCTTCACCGCTTTCAGCATCTGGAGTCCTCAAGGCTTTCTGGCCAAGATGGGCTTAATTGACTACTCTGGAGGATACGTCATCCATCTCTCTTCCGGGGTTGCCGGATTCACTGCTGCGTATTGGGTTGGTCCCAGGCTGAACAAGGACAGAGAGAGGTTTCCTCCCAACAACATACTGCTGATGTTGGCGGGAGCGGGATTGCTGTGGATGGGGTGGACGGGCTTCAACGGAGGGGACCCTTACTCGGTGGGCGTAGACGCCTCCTTGGCGGTGTTGAACACTCACGCATGCACCGCCACCAGCCTCCTCACCTGGGTCGTCCTCGACGTCATCTTCTTCCGCAAGCCTTCAGTGATCGGCGCAGTTCAGGGCATGATCACCGGCTTGGTCTGCATCACCCCGGCGGCCGGTGTTGTGCAGGGATGGGCGGCCATATTCATGGGGATATGCTCGGGCTCTATTCCGTGGGTGACGATGATGGTGGTCCACAAGAGATCCAGGCTGCTTCAAAAGGTTGACGACACCATGGCTGTGTTTCACACTCATGCCGTGGCGGGGTCTCTGGGAGGCATCATGTCGGGCCTGTTTGCGGAGCCCAAGCTGAACAATCTGTTCTATGGCGCGTACAACCAATATGTGGGCTTCTTCTACGGGCTGCAGATGAAGGACGCCAAAACAGGGCTGCGACAGGTCGGGGTGCAGTTGCTGGGGGTGCTGTTTGTGATGCTGGTGAATGTGATAGTGACAAGCCTCATATGTCTGTTCATTCGGTTCTGGATGCCTTTAAGGATGTCGGAGGAGGATATGGAGGTAGGGGACGAGGCAGCTCATGGGGAAGAGGCATATGCTATATGGGGTCAGGGCGACAAGCTTGACAGTTCCGTTTTCAAGTACGGCACTTCCTTGTATGACGATCTTGAGTCTGCAGAGCAGGCAAGGAAAAAGCGCAGTGCAGGACAGGTGGATCTTTCAATTCTGGTTCGCAAACTTCAAGGCGTAACCTTTAGATACACTTGTTCTAGTGTTTGCATAGTGATGCATGATGAATGTATATCATTTGTCATGAAGTGTAAATCAATGAGCGTGCTTGCTGGCAATTCTAGGATGACCTTCGTGAGATCCTCGTGTCATCCTTTCCGGTTGACCAATAAGAAGAGTTGGAGAGAAACTGTGATTTCAATGTACTTTAGGAGAATACAATGTCGAGATTGGAGGTGGGGCGTTTTGTTTCAGCCACCCAAATACTTTAGGCCAAGATGCTATGGTCATGGATGCTTTCAACCTCAGTGCCCTAATACTACTGTGGAAGAATGTGTTTCACATGATAGCATAATAAGGAGACGTCTATTGGAATCTTTTTTATCTAGGGTTGCATCTTCTAATAATAATTGTACTGATCTGAACAGAAGGCCTAGTCTATTTTTTAGAAGCACTCAGTTACGCTTCTACAGTTCTGAAAGTGATGGAAGGAATGCAAATGAGGATAAACATTTAAATGCAAATGATGGAGCTCACTGTGATAAGGGAAAGAACTGGCATGATAAGTTTGGGAAAGATGCGAAACTCTGTAATGCTCATGCTCGACTTGGGGAACAAGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTGCCATTGAGAATAAAAAGAGAGAATCACCCTTTTTAACGAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACGTTTCCTTACTATGTTCATGAGAATACCAAAAAACTTCTGGTTGAATGTGCTGCTTCCCATTTGAGACATAATAAGGTTGCTTCTTCTTTTGGCACTCGCCTCTCATCTTCAAGTGGTAGGATATTGCTCCAGAGCGTTCCTGGTACTGAACTCTATCGAGAGAGGTTAGTTAGAGCCCTTGCACAAGATCTAAAAGTCCGTTTGCTGGTGCTTGATAGCAATATCCTTGCTCCTTATTATATTGACGATGACTTATCATCATCAGATTGCGAGTCGGATGATGATAATGCAGAATCTGGAGAGGAGGCTTCTCTGGAGTCAGAGGATGAAGATGATAACAATGCAAGCAATGAAGAAGAGTGGACTAGCAGTACTGAGGCAAAGTCAGATGCTAGTGATAACGAAGAACATGATGCAATAGCAACTGCTGAAGCAGCCCTAAAGAAGGTGAAAGCTGCTGTTCAGAAACTTGTTCCCTACAACGTTGAAGACTTTGAGAAGAGGTCATCTCAAGAGTCAGAAAGTTCTGAGCCCACCAAATCTGAGGTTGTGAAGCCTTCCGACCACCAATCTGGATGCCAATTAAAGAAAGGTGACCGTGTGAAATACATTGGGCCGTCTGTTCAAATGAAAGACAACAATAGGATCATACTGGGGAAGATACTGACATCTGATGGTCCAACTAATGCTTACACTAATATCCATGGCAGATCTTTGTCCAATGGTCAACGGGGAGAGGTATATGAGGTGGAGGGGGATCAAGTTGCTGTTATCATGGACATCAGTGAAGATAATATGAAGGACGGTGAGATGGAGAAATCTAATGAACGTACAGAATCACGACTTTGTTGGATACATGTTAAGGACATTGAGCATGACCTTGATGCTCAAATACAGGATTGCTACATAGCTATGGAGGCTCTATGCGAGGTTCTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACAGTACACACTGGTTTCATAAATCAGTCCTGAAGTCAAACAGAAAGGAGTTCTTTCATAAGGTTCAAGAAATGTTTCACAATTTGTCTGGACCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCAGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCGACGAAGAGACTGGATGATGATGAAATCAACAAGCTTTTCACTAATGTTTTGTGCATAAATCTGCCTAAGGAGGAGGATCAGCTTGGAACTTTCAAAAAGCAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAGTTTGAATGAACTACATAAGGTTCTTGAAGAAAATGAGCTATCATGCTTGGACCTCTTGCAAGTAAATACCCACGATCTCATTCTGACAAAGCAAAAAGCTGAAAAGGTGGTGGGCTGGGCCAAAAATAATTACTTGTCATCTTGCACACTTCCATATGTTAAAGGAGAAAGATTGTGCCTGCCTCGTGAAAGTCTTGAAACTGCAGTCTCAAGATTGAGGGATCAAGAAACTATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTTGCTAAGGATGAGTATGAGAGCAACTTTATTTCGGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACGTAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTTGTCATCCTTCCAATGAGAAGACCAGAGCTTTTCTCTCGTGGAAACTTGTTACGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTTCTGGCCAAGGCTATTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGGTTCAACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTTACCAAAGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATCCTCATTCTTGGTGCAACAAACAGGCCTTTTGACCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATATGTGGATTTGCCAGATGCTGAAAATCGGATGAAGATTTTAAGAATCTTCCTTGCACAAGAAAATCTTGATCTTGATTTTCAGTTTGACAAACTCGCTAACTTGACTGAGGGATACTCTGGCAGTGATCTGAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAAGAGCTTCTAGAGAATGAAAAGAAGGCGAGCTACAGTGACTTAACACCGACATTAAGGCCTCTAAAATTGGATGATTTTATTCAGGCAAAATCCAAGGTTGGGCCATCAGTTGCCTATGATGCAGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGTAGGACAAAATCTCCATTTGGATTTGGAAGCTAA 4749 0.4559 MASPPVSTDYMDKADNAWQLTAATLVGMQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFVCWVMWGYRLSFGDKLAPFWGKPALSLDEAYLLKEAFLGLFPNATMVYFQGVFACITLILIAGALLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSPQGFLAKMGLIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYSVGVDASLAVLNTHACTATSLLTWVVLDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAAIFMGICSGSIPWVTMMVVHKRSRLLQKVDDTMAVFHTHAVAGSLGGIMSGLFAEPKLNNLFYGAYNQYVGFFYGLQMKDAKTGLRQVGVQLLGVLFVMLVNVIVTSLICLFIRFWMPLRMSEEDMEVGDEAAHGEEAYAIWGQGDKLDSSVFKYGTSLYDDLESAEQARKKRSAGQVDLSILVRKLQGVTFRYTCSSVCIVMHDECISFVMKCKSMSVLAGNSRMTFVRSSCHPFRLTNKKSWRETVISMYFRRIQCRDWRWGVLFQPPKYFRPRCYGHGCFQPQCPNTTVEECVSHDSIIRRRLLESFLSRVASSNNNCTDLNRRPSLFFRSTQLRFYSSESDGRNANEDKHLNANDGAHCDKGKNWHDKFGKDAKLCNAHARLGEQDQEEWLKNEKIAIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYVHENTKKLLVECAASHLRHNKVASSFGTRLSSSSGRILLQSVPGTELYRERLVRALAQDLKVRLLVLDSNILAPYYIDDDLSSSDCESDDDNAESGEEASLESEDEDDNNASNEEEWTSSTEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNVEDFEKRSSQESESSEPTKSEVVKPSDHQSGCQLKKGDRVKYIGPSVQMKDNNRIILGKILTSDGPTNAYTNIHGRSLSNGQRGEVYEVEGDQVAVIMDISEDNMKDGEMEKSNERTESRLCWIHVKDIEHDLDAQIQDCYIAMEALCEVLDSKQPLIVYFPDSTHWFHKSVLKSNRKEFFHKVQEMFHNLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRLDDDEINKLFTNVLCINLPKEEDQLGTFKKQLEEDRKIVISRSSLNELHKVLEENELSCLDLLQVNTHDLILTKQKAEKVVGWAKNNYLSSCTLPYVKGERLCLPRESLETAVSRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVKFDDVGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKAIATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDLDFQFDKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASYSDLTPTLRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGFGS 1582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0017 1582 SMART AAA_5 1325 1462 IPR003593 GO:0016887
Acco12g0017 1582 NCBIfam ammonium transporter 15 431 IPR001905 GO:0008519|GO:0016020|GO:0072488
Acco12g0017 1582 FunFam Ammonium transporter 1 434 - -
Acco12g0017 1582 Gene3D Ammonium transporter AmtB like domains 5 435 IPR029020 -
Acco12g0017 1582 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 709 1575 - -
Acco12g0017 1582 MobiDBLite consensus disorder prediction 896 929 - -
Acco12g0017 1582 MobiDBLite consensus disorder prediction 896 914 - -
Acco12g0017 1582 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 1287 1463 - -
Acco12g0017 1582 SUPERFAMILY Ammonium transporter 10 413 - -
Acco12g0017 1582 Gene3D - 1288 1564 IPR027417 -
Acco12g0017 1582 Pfam ATPase family associated with various cellular activities (AAA) 1329 1459 IPR003959 GO:0005524|GO:0016887
Acco12g0017 1582 Pfam AAA+ lid domain 1482 1517 IPR041569 -
Acco12g0017 1582 Pfam Ammonium Transporter Family 17 431 IPR024041 GO:0008519|GO:0016020|GO:0072488
Acco12g0017 1582 MobiDBLite consensus disorder prediction 817 847 - -
Acco12g0017 1582 ProSitePatterns AAA-protein family signature. 1432 1451 IPR003960 GO:0005524|GO:0016887
Acco12g0017 1582 ProSitePatterns Ammonium transporters signature. 169 194 IPR018047 GO:0008519|GO:0016020|GO:0072488
Acco12g0017 1582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1288 1549 IPR027417 -
Acco12g0017 1582 MobiDBLite consensus disorder prediction 817 866 - -
Acco12g0017 1582 Gene3D - 1461 1546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0017 Acco-ChrAcco12 254007 270869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0017 106 443 Inorganic Solute Cotransporters AT2G38290 63.314 5.49e-141 436