Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0012 ATGTCGCGTCAGACTCCCACCTCCGCCTTTATTAAATCCAAGACCCTCGACAATAAATATATGCTTGGAGATGAGATAGGGAAAGGAGCATACGGTCGAGTTTACAAAGGTTTGGACCTAGAAAATGGAGACTTCGTTGCGATTAAGCAAGTTTCATTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATTGATTTATTAAAGAATTTGAATCATAAGAACATTGTAAAATATCTTGGATCCTTAAAGACAAAGACTCACCTTCACATTATTCTTGAGTATGTGGAAAATGGTTCACTTGCTAATATTATCAAGCCAAATAAATTTGGACCCTTTCCAGAATCATTAGTTGCTGTTTATATTGCTCAGGTATTGGAAGGCTTGGTTTACCTACATGAACAGGGTGTCATCCATCGGGATATCAAGGGTGCAAATATATTGACAACTAAAGAGGGTCTAGTCAAACTTGCTGATTTTGGGGTGGCGACAAAGTTGACTGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACTCCATATTGGATGGCTCCAGAGGTCATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACTGTTATTGAACTTCTTACATGTGTGCCTCCATATTATGATCTACAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAGCATCCTCCAATTCCTGATAGCCTGTCTCCTGATATCACTGATTTTCTGCGTCAATGCTTTAAGAAGGATGCTAGACAAAGACCTGATGCTAAGACACTGTTATCTCACCCATGGATACAAAATTGTAGGCGTGCGTTGCAGTCATCTCTTCGACACAGTGGAACGTTAAGAAATATAGAGGAAGATGATTCTGCAGATGTAGCAGCTTCTGATCATCAGAAGAGTGCTGTTGAAGGCTCAGCCATGGAGAAAGTGAACCCATTGAAAGAGTTGTCAATTGAGGTTGCTGGTGGCAGCAAACATCATGAGGACGTAGGTTCAGATTCTGATTTTCTGAATGAGAAAACAGAGAAGCAGGATGATGTGTTTTCAGATCAAGTTCTCACTTTAGCTATTCATGAGAAGTTGTCTCTACAAACTGGATCTAGTAAGCCCTGTTCTAATGGAGAAGTTGCTATAACGGAGATGAGTGCTGATCATGACACTCCCAATACTAAAGACCATAATGAAGTCCTGATGCACGGAGAAGTTGGATCTCCAGAATCAAGAGGGATAGATAAAAGGCCTGGGGGAAAAGGTAGTTCTGTCACCAGTGGCGGTATATCATTCTGTTTTGGACCAAGAGGTCAGGATAATGGTTCCCTAAAGCTCAAGTCCACTGAAGAGCTTACAAGATACAATATGCCTCAATTATTTGCTATAGTTCTGCAAGAAAATGGAATTTGCTTTTGGTTTTTCATGAATGATAACATATCAGACTTTACTGATTTCTGTTTGAAGGCTATGAAGATGCTTCCCTCTTTGGAAGGGAATGAGCTGAGCAGATTTAGCGATCCCCCTGGAGATGCCTCTTTAGATGATTTATTTCATCCATCAGACAAACACCCTAGAGGCTCTGCAGCTGAGGCTTCCACGTCTGCATCCACATCACACGTGGCAAATGATAATGCCTCCATTAACAATGGCGGAAAAAGTGACCTGGCAAAAGAGTTGAGGGAAACTATTGCTCGGAAGCAGTGGGAGAAGGAGATGGAAAATGGGAAGGAAAATAGTGGTGGGAATCTTTTACGGTTAATGATGGGAGTCATAAAAGATGATGTGATTGATATAGATGGTCTGGGTTTTGATGAAAAATTGCCGGGAGAAAACCTGTTCCCTTTGCAGGCTGTTGAGTTCAGCAAATTAGTTGGGTCATTGCGATCAGACGAATCTGAAGATGTGATTGTCACTGCATGTCAGAAACTTATTACTATCTTTCACCAACGTCCTGAGCAGAAGATTGTTTTTGTCACCCAGCATGGTTTACTTCCTCTTACAGACTTGCTAGAAGTTCCTAAAACTCGTGTCATATGTTCGGTACTCCAGCTTATAAATCAAATCATTAAGGATAATACTGATTTTCAAGAAAATGCTTGCCTTGTTGGATTGATTCCTGTGGTGATGAGGTTTGCAGTACCTGATCGTCCACGAGAAATTCGCATGGAAGCAGCTTTTTTTTTGCAGCAGCTTTGTCAGTCAAGCTCTTTGACATTGCAAATGTTTATAGCTTGTTGTGGAATCCCAGTTTTAGTGGGATTTCTGGAGGCTGATTATGCAAAGTACAGGGAAATGGTACATCTGGCTATTGATGGCATGTGGCAAGTCTTTAAGCTTCAGCGATCAACCCCTAGAAATGACTTTTGTCGAATAGCTGCCAAGAATGGAATACTCCTGAGGCTTATAAACACCCTGTATAGCTTAAATGAGGCAGCACGACTAGCTTCTATATCTGTTGGGGTTGGATTTCCAGTTGATGGTTTGGCTCAACGGCCACGGTCTGGTCCCTTGGATTCAACACATCCTACTAGCATCCAGAATGATGCACCGCTGTCTTTGGCAGACCAATTGGATCTCCCTAAAGTGAGGCACGGGATACTTGACCATCACTTGGAACCTTTACATGCCTCAACCTCACATCCTCAAAGATCAGATGGTAACTACTCTGTAGACGTTGATAGGCTTCAATCTAGCAATGCAGTGGCTGAATTTACATCAGAAAAGAGTGCAAATGTTGCATCCAGGGAATCTTCAAAGGAGAGAGACAATGTGGATCGATGGAAAACTGATTCTTCTCGAGCAGATGTTGAACTTAGACAACAACGTATTGGTAATTCTGCTAGCAGGGCATCAACAGATAGGGCTTTGAAACTGACAGAACCAGCATCGAATGGATTATCACTGGGGGGAGCTACACAGCAAGAGCAAGTTAGACCTCTTCTTAGCTTGTTAGAGAAAGAGCCTCCATCGAGACAAATATCTGGTCAGCTTGAATATGTGCGCCAGTTTTCAGGATTAGAAAGGCATGAAAGTGTACTCCCTTTACTACATGCCTCTGAGAAGAAGACAAATGGTGAGCTGGACTTTTTGATGGCAGAATTTGCAGATGTTTCCCTACGTGGAAGAGAAAATGGAAATCTTGACACTGGTACTAGAGTGTCATACAAAGATGCTTCAAAGAAACCAGGGGCTTTTGGGTCTAATGAAGGGGCTGCTTCCACATCTGGGATTGTATCTCAGACAGCTTCAGGTGTGCTATCTGGTTCAGGAGTCTTAAATGCCAGACCAGGCAGTGCAACTTCATCTGGGCTCCTTTCCCACATGGTTTCATCGTTGAATGCTGATGTTGCCAGGGAGTACCTAGAAAAAGTAGCAGATCTTTTGCTTGAGTTTGCTCAAGCTGACACGACAGTAAAGTCTTATATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCAGATTCTGTTAAAGATACTGAAGTGTATTAATCATCTGTCAACTGATCCTAACTGCCTGGAGAATCTCCAACGTGCTGAAGCAATAAAATACTTGATACCAAATTTGCAACTCAAAGAAGGGCCTCTAATATCACAGATACACCATGAGGTCTTGAATGCGCTGTTCAATTTATGCAAGATAAACAAGAGGAGGCAAGAACAAGCTGCTGAAAATGGGATTATTCCCCATTTGATGCAATTCATCACCTTAAATTCTCCCTTGAAACAATATGCTTTGCCTCTATTGTGTGACATGGCCCATGCATCTCGAAATTCAAGGGAGCAGTTAAGGGCCCATGGTGGTTTGGATGTCTATTTGAACCTTCTTGAGGACGAGCTTTGGTCAGTGACGGCATTAGATTCTATTGCTGTTTGCTTGGCTCATGATAATGACAACAGGAAGGTTGAACAAGCATTACTGAAAAAGGATGCAGTGCAGAGGCTGGTGAAGTTCTTCCAGACTTGTCCAGAGCAGTATTTTGTGCACATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGTACGGATCAATACCACATTAGCTGTTAATGGATTAACGCCTTTACTGATTGCAAGGCTTGATCATCGAGATGCTATAGCTCGTCTTAATTTACTCAAGCTAATAAAGGCTGTTTATGAGCACCACCCTCAGCCCAAGAAACTGATTGTGGAGAATGATTTGCCTCAGAAGCTACAGAACTTAATAGAGGAAAGAAGAGATGGACAAAGCTCGGGAGGCCAAGTGTTGGTCAAACAGATGGCTACTTCCTTACTTAAAGCTTTACACATAAACACCGTTTTGTAA 4350 0.4218 MSRQTPTSAFIKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTLRNIEEDDSADVAASDHQKSAVEGSAMEKVNPLKELSIEVAGGSKHHEDVGSDSDFLNEKTEKQDDVFSDQVLTLAIHEKLSLQTGSSKPCSNGEVAITEMSADHDTPNTKDHNEVLMHGEVGSPESRGIDKRPGGKGSSVTSGGISFCFGPRGQDNGSLKLKSTEELTRYNMPQLFAIVLQENGICFWFFMNDNISDFTDFCLKAMKMLPSLEGNELSRFSDPPGDASLDDLFHPSDKHPRGSAAEASTSASTSHVANDNASINNGGKSDLAKELRETIARKQWEKEMENGKENSGGNLLRLMMGVIKDDVIDIDGLGFDEKLPGENLFPLQAVEFSKLVGSLRSDESEDVIVTACQKLITIFHQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIIKDNTDFQENACLVGLIPVVMRFAVPDRPREIRMEAAFFLQQLCQSSSLTLQMFIACCGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQRSTPRNDFCRIAAKNGILLRLINTLYSLNEAARLASISVGVGFPVDGLAQRPRSGPLDSTHPTSIQNDAPLSLADQLDLPKVRHGILDHHLEPLHASTSHPQRSDGNYSVDVDRLQSSNAVAEFTSEKSANVASRESSKERDNVDRWKTDSSRADVELRQQRIGNSASRASTDRALKLTEPASNGLSLGGATQQEQVRPLLSLLEKEPPSRQISGQLEYVRQFSGLERHESVLPLLHASEKKTNGELDFLMAEFADVSLRGRENGNLDTGTRVSYKDASKKPGAFGSNEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPQILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLQLKEGPLISQIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITLNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQRLVKFFQTCPEQYFVHILEPFLKIITKSVRINTTLAVNGLTPLLIARLDHRDAIARLNLLKLIKAVYEHHPQPKKLIVENDLPQKLQNLIEERRDGQSSGGQVLVKQMATSLLKALHINTVL 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0012 1449 Gene3D - 618 826 IPR011989 -
Acco12g0012 1449 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Acco12g0012 1449 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Acco12g0012 1449 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Acco12g0012 1449 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Acco12g0012 1449 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Acco12g0012 1449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Acco12g0012 1449 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0012 1449 FunFam MAP3K epsilon protein kinase 1 619 827 - -
Acco12g0012 1449 MobiDBLite consensus disorder prediction 945 960 - -
Acco12g0012 1449 MobiDBLite consensus disorder prediction 510 559 - -
Acco12g0012 1449 MobiDBLite consensus disorder prediction 908 962 - -
Acco12g0012 1449 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0012 1449 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0012 1449 Gene3D Transferase(Phosphotransferase) domain 1 17 314 - -
Acco12g0012 1449 CDD STKc_Cdc7_like 19 274 - -
Acco12g0012 1449 SMART arm_5 1229 1268 IPR000225 GO:0005515
Acco12g0012 1449 SMART arm_5 657 697 IPR000225 GO:0005515
Acco12g0012 1449 MobiDBLite consensus disorder prediction 920 944 - -
Acco12g0012 1449 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 771 - -
Acco12g0012 1449 FunFam MAP3K epsilon protein kinase 1-like 1098 1444 - -
Acco12g0012 1449 Gene3D - 1104 1252 IPR011989 -
Acco12g0012 1449 MobiDBLite consensus disorder prediction 1057 1081 - -
Acco12g0012 1449 MobiDBLite consensus disorder prediction 534 558 - -
Acco12g0012 1449 SUPERFAMILY ARM repeat 1110 1422 IPR016024 -
Acco12g0012 1449 SUPERFAMILY ARM repeat 628 823 IPR016024 -
Acco12g0012 1449 Gene3D - 1253 1441 IPR011989 -
Acco12g0012 1449 FunFam MAP3K epsilon protein kinase 1 17 306 - -
Acco12g0012 1449 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0012 Acco-ChrAcco12 173042 194780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0012 1 1449 MAP Kinase Kinase Kinase AT3G13530 70.102 0.0 1965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Acco12g0012 Pkinase 9.8e-73 CL0016