Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0011 ATGAACACTGTCTTTTGCCTTTTGTTTTTTTGTAAAGGTTTGAAGTTGGATAAGGAAATCTTGTATATGATGAGTACTCGAGCGCTCAGGGGTGCCACTGTTAGAAGTTACCGGCGGAGAAAGTCTGCGTTGGACTTGGACCTTAACCAGGCCCCGCCTGGTGAAAGTCGGGAGCTGGAGGGACCTTCAACTCAGCTGGAGCCTCAAGGAGTTCAAGCTATTCTTCAACCGCAGGTTGGACAACCTGCAATGATTGATGTTGAGGCCATTGATGATGATGTTGTTGAATCTACTCCCCGGGCCTTTGCTGAGGCTAAAAACAATTCAAGGAGAAACCGAAGCAGGGTTATAGTTGATGTGGATTTAGAAGATCGGACTAGGGTAACTAGGAATAATCACAACAAACGCAGAAGAGATTATCCAAGCCAAACAATTATTAACTGTGATCTTTATATAAACTTGGAGGGCAGTAGCAGTTCTATGAAAGAAGTTGTTAAGAAATCTCCTGAACCACCCAAAGAGCCTGTTTTCAACTGCCCAATATGCATGGGTCCTTTGGTTGAAGAAATGTCGACCAGGTGTGGTCATATTTTTTGCAAGAGTTGCATTAAGGCGGCAATAAATGCACAGGGTAAATGCCCTACCTGTAGGAAAAAAGTTACTGCAAAAGAGCTCATAAGGGTTTTTCTCCCATCAACTAGTTGA 705 0.4355 MNTVFCLLFFCKGLKLDKEILYMMSTRALRGATVRSYRRRKSALDLDLNQAPPGESRELEGPSTQLEPQGVQAILQPQVGQPAMIDVEAIDDDVVESTPRAFAEAKNNSRRNRSRVIVDVDLEDRTRVTRNNHNKRRRDYPSQTIINCDLYINLEGSSSSMKEVVKKSPEPPKEPVFNCPICMGPLVEEMSTRCGHIFCKSCIKAAINAQGKCPTCRKKVTAKELIRVFLPSTS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0011 234 PANTHER ELFLESS, ISOFORM B 24 234 - -
Acco12g0011 234 MobiDBLite consensus disorder prediction 44 67 - -
Acco12g0011 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 232 IPR013083 -
Acco12g0011 234 SUPERFAMILY RING/U-box 178 223 - -
Acco12g0011 234 ProSiteProfiles Zinc finger RING-type profile. 179 217 IPR001841 -
Acco12g0011 234 SMART ring_2 179 216 IPR001841 -
Acco12g0011 234 ProSitePatterns Zinc finger RING-type signature. 194 203 IPR017907 -
Acco12g0011 234 Pfam Zinc finger, C3HC4 type (RING finger) 178 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0011 Acco-ChrAcco12 164141 166881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0011 35 233 C3H Transcription Factor Family AT5G48655 52.736 3.34e-53 169