Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0010 ATGGTGGTGATCATGCAGCAGCAGCAGAACCCCTCTGCACTGGTGCCACAGCTCAACAACAATCCTCAGTCCTCCTCTGCCACCACCACCTCCTCCCTTAGGTCGCCGCCTTCTGCAACACCACTACCGGGGTCCCCGCTATCTTCCTCACTCCCTCTTATTTCTCCTCTCCCTGCTCCCCTACGCCAAACTCATCTGCCATCACTGCCACCTGATCATGTTATTGGACAAGTGGTGCCCATCGCCGCCACGCACCCTTCCGGTGAGCCCGCTTTGATAGCGCCTCCTGCCTGCCCGTTGCCTAGAGTCCGACTCTCGGATATTGCCCTTTACGACGGAGCTCCAGCTGGGTCCTTTGTCAGAGCAGTGGAAGTACTGTCAGGGTCTTTGATGAGGCATAATGCAGCCTTGATCGAATTGGGCTGCGAGAATACCGCTCTGATGAGGTGCGGATTGGAAGGTTCGAGATTGTTCTTTCGGAGCAGGGCCCATCTGGGTGGTGGGAAGGGAAGCCGTGGGGTTCACATGTACAGGGCAGGAAGGGCTTTGGAAGACTGGGATTCATCTCCACCATGTATGGCCGATATTTTTAGGTGCATGGGAAAGGCAGCTCGTACTACTTTGTGTGCCATCGCTAGGCATCTTCGTCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATACCCCATTGCCTGCTAATGAGGTGTCCTCATCAGTTCTTGTTGCGACCTACTCACATGCTTCTTTGCCAAATGGAAAAGGTGCTATTGGAGGTGGTAAGCCAACCATGAATGGTGAAATTGAGAAGGGTTTGTTGACATTGATTTCTTCAGACACACCTGGTCTTCAGGTCTGTGACCCCAATGGCCGCTGGTATCTTGCTGATAGTGGGTCTGGTCCTGGGGATCTTTTGTTGCTCACAGGCAAGGCACTTAGCCAAGCCACTGCAGGGCTTCGTCCTTCAGCATCATATAGAACTTCACCTGATTATTTTCTAGGTGCTAACAGTGGAGGAAGGACATCTCTTGCATTTAGACTCATGCCGCAGGGCAATGCTATATTGGACTGTTCTCCAATTGCAGCAGCTGGACATGTTATTCCCCAAAGCTATGTTCCAATATCAGTAAGCCAGTTTATGGATGACCTTTCTGCTGAAGAAGTGATAGGCAGCCGATCTTATCCTAGTTATGCTGCTGGAAACAATGTGAATAAGGAACAATCATTGAGAAGTGTTCTGTCAGATCCTTTGTCTGGCGCATTCCTTGAAGACGCCATGTTTGTCTCGTGTGGGCATTCATTTGGTGGTCTCATGCTAAGGAGAGTCATCGAAACTTCAAGATGTACTCTCTGCAATACAAATATTGAGACCAGTTCTCTGATCCCCAATTTTGCTCTAAGAGCGGCGGCCACCGCAGTCAAACATGAGGATGATCGGCGGTTATTTCATAATGCTGTTCTTCGAAAGCGCCGGAAAGAAATGGGTGATCAAATGGATTCACTGAGAAGAACAAACAGGGAAAATAGAGATGTTACTGGTGATGACGGACCTGTCCGGGGAGTACGGTATCCTTTTTCAGTAAATGAGAAGGTTATAATTAAGGGTAATAGGAGGACACCAGAAAAATTCGTTGGCAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTTAAGATTATTGGTACTGGGGAAAATGTGCGCTTGCAATACCGGTCTCTTAGGAAGCTATTGAACTCACAAGCGATAGAGGACCCAGGCACAGCCAATTCATAA 1785 0.4891 MVVIMQQQQNPSALVPQLNNNPQSSSATTTSSLRSPPSATPLPGSPLSSSLPLISPLPAPLRQTHLPSLPPDHVIGQVVPIAATHPSGEPALIAPPACPLPRVRLSDIALYDGAPAGSFVRAVEVLSGSLMRHNAALIELGCENTALMRCGLEGSRLFFRSRAHLGGGKGSRGVHMYRAGRALEDWDSSPPCMADIFRCMGKAARTTLCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATYSHASLPNGKGAIGGGKPTMNGEIEKGLLTLISSDTPGLQVCDPNGRWYLADSGSGPGDLLLLTGKALSQATAGLRPSASYRTSPDYFLGANSGGRTSLAFRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEEVIGSRSYPSYAAGNNVNKEQSLRSVLSDPLSGAFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNTNIETSSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMGDQMDSLRRTNRENRDVTGDDGPVRGVRYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLLNSQAIEDPGTANS 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0010 594 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 98 585 - -
Acco12g0010 594 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 407 477 IPR013083 -
Acco12g0010 594 SUPERFAMILY Clavaminate synthase-like 190 359 - -
Acco12g0010 594 MobiDBLite consensus disorder prediction 1 47 - -
Acco12g0010 594 SUPERFAMILY RING/U-box 409 475 - -
Acco12g0010 594 Gene3D - 172 388 IPR027443 -
Acco12g0010 594 Coils Coil 484 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0010 Acco-ChrAcco12 142595 161623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0010 409 589 Plant U-box Gene Family AT5G05230 42.077 1.12e-38 144