Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2475 ATGGCGGGAGTTTGGTCTGTGGTGCTGATGATTCTCTTCCATAGATTCTCTTTGACCGAGGCTGGCTCGAATCATTCCACAAGACCCGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAACACCACCATCGGTCAAATTGTAAAGACTGCAACAGAAGCTGCAATTGAAGATGTAAATTCTGATCCATCTATTCTTGGTGAAACTAAGCTCAAAGTCTCAATGCAAGAAGATTCCAAATACAGAGGCTTTCTGAGTATTGCCGAGGGTAGGATCTCTTTTAAAGCTCCTATGAGCCCTGAAGCAACCAGGGAGGAGATTACGAATGTGCTTGTTCAGGTGGCTTTGGCAGAGTCTAGGGTAATAGTTCTACATGCCAATGCTGCTTGGGGACCCAAGGTGTTTAGAGTGGCAAAGTATCTGGAGATGATGGGATCTGGGTGGAAAAACGTGACTCGCCTTGGACTGAGTAGTTATGCTCTCTATGCATATGATACTGTTTATGTGCTTGCTCGTGCGCTCGATAGTTTCTTCAAACAAGGGAATCGAATAACATTCTCGTATGATCCCAAATTGTCAGAGCTGCGCGACAACAACTTGAATCTTGGTTCTCTGAGCATCTTCGATGAAGGGAAGGTGTTGAGAGAAAGTATCTACGAGGTTGATATGGCAGGGGTTACTGGTACTTTCAAGTATGCATCCGACGGAAACCTTGTGAATCCGGCATATGAAATCCTCAATGTGATCGGGACAGGAAGCAGGAGAATTGGTTTTTGGAGTAACTACACGGGATTATCAGTTGTTGCTCCAGAAGTACTCTATGCAAACCCGCCCAATCGTTCAGCGGCGAGTCAGAAGCTACGGCCAGTGATTTGGCCAGGGGACACAGCGCAGAAACCTCGTGGTTGGGTTTTTCCAAGCAGTGGGAGGCTCTTAAAAATTGGAGTGCCAGTAGGTTTTAGTTACCGTCAATTTGTGTCACATGTACAGGGCACTGACATGTTCAAGGGCTTCTGCATTGAGGTGTTTCTTTCTGCACTCAACTTGCTTCCTTATGGCGTGCCTTATAGGCTTGTTCCATTTGGGGATGGTCACAACAATCCTAATAACAACGAGCTTGTTCGTTTGGTGGCGGCGGGCGAATTTGATGGAGCGGTTGGTGACATTACAATTACTACGCAGCGAACAAGGATGGTAGATTTCACTCAGCCATTTATTGGGTCTGGTCTGGTGGTTGTGGCCCCGGTTTGGAAGTCAGACTCCAGTGCTTGGGCCTTTCTGAGACCCTTTAGTCTGGAGATGTGGGGCGTCACAGCCATCTTTTTCCTGGCTGTTGGAGCTGTTGTTTGGATTTTGGAGCACAGATTCAATGATGAATTCCGGGGACCTCCCAGAAAACAATTTGTTACAGTTTTGTGGTTCATTTTTTCAACCATGTTTTTCGCCCACAGGGAAAATACAGTGAGCACACTTGGTCGATTTGTGCTTCTGATATGGTTGTTTGTGGTACTCATAATAAACTCGAGTTACACGGCGAGCCTGACCTCAATCCTCACAGTGCAGCAGCTTTCTTCTCCCATTAAAGGCATTGAAACTTTGGTTGCCAGCAAAGAGCCGATAGGCTACCTACAGGGTTCCTTCAGTAGAAACTATCTAATAGAAGAAATTGGGATTGATGAGTCAAGACTTGTTCCTCTGAGGACACCGGAAGAGTCTGCTAAAGCATTAAGAGATGGACCCAAGAAGGGAGGTGTTGCCGCGTACGTTGATGAGCGTGCTTACATTGAACGCTTCCTCTCAAGCCGATGTGACTTCGCCGTAGTAGGTCAAGAGTTTACCAGAAACGGTTGGGGATTTGCATTTCCACGGGACTCGCCTCTGGCGGTTGACTTGTCGACGGCTATATTGAAAATGGCAGAGAACGGGGATCTGCAAAGGATTCATGACAAGTGGCTTCTGAACATGGCTTGCCTGTCACAAAATGCAAAGTTTGAAGTGGACAGGCTTCGGCTGAAAAGCTTTTGGGGGCTCTATCTGATCTGCGGGGTGGCGTGCGTGGTCGCATTATTAGCATATATCGTACTGATGATGAGGCAGTACAAGAAGCACTACGTGGGGGAGGTTGAGCCATGTGCCAGATCTTCTTCCAGCATTCGCACTTTCCTTACATTTGCAGACCAGAAAGAATCTGAAGTCAAAAGCCGATCCAAGAGAAGGCTAACGGAGAGGCTCTCTCTCGGAAGCTCAAATGCTGCCGCTCAGGCCTGA 2268 0.4713 MAGVWSVVLMILFHRFSLTEAGSNHSTRPDSVNIGVLYSFNTTIGQIVKTATEAAIEDVNSDPSILGETKLKVSMQEDSKYRGFLSIAEGRISFKAPMSPEATREEITNVLVQVALAESRVIVLHANAAWGPKVFRVAKYLEMMGSGWKNVTRLGLSSYALYAYDTVYVLARALDSFFKQGNRITFSYDPKLSELRDNNLNLGSLSIFDEGKVLRESIYEVDMAGVTGTFKYASDGNLVNPAYEILNVIGTGSRRIGFWSNYTGLSVVAPEVLYANPPNRSAASQKLRPVIWPGDTAQKPRGWVFPSSGRLLKIGVPVGFSYRQFVSHVQGTDMFKGFCIEVFLSALNLLPYGVPYRLVPFGDGHNNPNNNELVRLVAAGEFDGAVGDITITTQRTRMVDFTQPFIGSGLVVVAPVWKSDSSAWAFLRPFSLEMWGVTAIFFLAVGAVVWILEHRFNDEFRGPPRKQFVTVLWFIFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIETLVASKEPIGYLQGSFSRNYLIEEIGIDESRLVPLRTPEESAKALRDGPKKGGVAAYVDERAYIERFLSSRCDFAVVGQEFTRNGWGFAFPRDSPLAVDLSTAILKMAENGDLQRIHDKWLLNMACLSQNAKFEVDRLRLKSFWGLYLICGVACVVALLAYIVLMMRQYKKHYVGEVEPCARSSSSIRTFLTFADQKESEVKSRSKRRLTERLSLGSSNAAAQA 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2475 755 PIRSF IGluLR_plant 2 90 IPR017103 -
Acco11g2475 755 PIRSF IGluLR_plant 148 755 IPR017103 -
Acco11g2475 755 PIRSF IGluLR_plant 82 152 IPR017103 -
Acco11g2475 755 Gene3D - 241 265 - -
Acco11g2475 755 Gene3D - 423 547 - -
Acco11g2475 755 SMART GluR_14 313 654 IPR001320 GO:0015276|GO:0016020
Acco11g2475 755 Pfam Bacterial extracellular solute-binding proteins, family 3 369 652 IPR001638 -
Acco11g2475 755 Gene3D - 156 240 - -
Acco11g2475 755 FunFam Glutamate receptor 423 553 - -
Acco11g2475 755 Gene3D - 307 422 - -
Acco11g2475 755 Gene3D - 581 621 - -
Acco11g2475 755 SUPERFAMILY Periplasmic binding protein-like II 290 653 - -
Acco11g2475 755 SUPERFAMILY Periplasmic binding protein-like I 28 294 IPR028082 -
Acco11g2475 755 CDD GluR_Plant 312 652 - -
Acco11g2475 755 Pfam Ligand-gated ion channel 653 685 IPR001320 GO:0015276|GO:0016020
Acco11g2475 755 Pfam Receptor family ligand binding region 158 250 IPR001828 -
Acco11g2475 755 Gene3D - 622 652 - -
Acco11g2475 755 Gene3D - 64 150 - -
Acco11g2475 755 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 92 725 IPR015683 -
Acco11g2475 755 FunFam Glutamate receptor 307 423 - -
Acco11g2475 755 FunFam Glutamate receptor 549 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2475 Acco-ChrAcco11 37788769 37791986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2475 5 89 Ion Channels AT3G51480 43.529 5.27e-15 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2475 11 37788769 37791986 Acco12g0318 12 2750449 2763548 CCT
Acco11g2475 11 37788769 37791986 Acco11g2475 11 37788769 37791986 ECH
Acco12g0318 12 2750449 2763548 Acco11g2475 11 37788769 37791986 ECH