Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2474 ATGTCGCCGAAGCCTGTGTCCGCTTCGAAGTCAAACCCCTACTTCAAACCCGGTTCCGCCGTCGAGGTAAGCTCCGACGATGAAGGATTTCGCGGATCTTGGTTTGTTGGCACCATTATTCGCCGCTGCACTTCCAAGAAAAACCAGAACAAATTCTTGGTGGAGTATAAAACTATCATGGCCGATGAGAAGGGTTCCAAACCCTTGAGAGAGATGCTGGACATTCACCAGCTTCGACCCCTCGCCCCGAGGGAGACTGACCGCCAATTCAAGTTCGGCGAGGAGGTCGATGCTTACCAGAACGATGGTTGGTGGGAAGGCTCCATAACCGAAGAATTGGGTAACGGGAGGTTCGCGGTGTATTTCAGGGCTTCAAAGGAGCAGATTGAGTTCGGGAAGGAGGACCTTAGGCTTCATCGCGAGTGGGTCAATGAGAATTGGGTCCCTCCATTGGAAGAACCGTCGGAGGAAAAGAAAATTTTGACAAATGATGTGAAGGCTAGTGAACAAACAGTGACGGACATGTTTAGCAAGGGGACACTAGTTGAGGTTAGCAGTGATGAGGAAGGTTTTGAAGGAGCTTGGTTTGCTGCTACTGTTGTTGAACCAAAGGGAAAGAATAAGTTTCTTGTTGAGTATATGAACCTGCGGACTGATGATGATTCAGAGTTTTTGAGGGAAGAGATTGATATCTTACATATTCGGCCTTATCCACCAGAACATGTTTGTGATCAGTTTAATCTTCTTCAAGAAGTTGATGCTTTGTACAATGACGGATGGTGGGTTGGAGTGATTTCCAAAGTTCTCAGCAACTCAAGGTATGTAGTATACTTCAGGAACACTAATGAAGAATTAGAGCTTCCGCACTCTGAGATAAGGCTACATCAGGACTGGATCAACGGAAAATGGGTAATTGCTTCTAAGGCATTGAAGTTGTAG 939 0.4654 MSPKPVSASKSNPYFKPGSAVEVSSDDEGFRGSWFVGTIIRRCTSKKNQNKFLVEYKTIMADEKGSKPLREMLDIHQLRPLAPRETDRQFKFGEEVDAYQNDGWWEGSITEELGNGRFAVYFRASKEQIEFGKEDLRLHREWVNENWVPPLEEPSEEKKILTNDVKASEQTVTDMFSKGTLVEVSSDEEGFEGAWFAATVVEPKGKNKFLVEYMNLRTDDDSEFLREEIDILHIRPYPPEHVCDQFNLLQEVDALYNDGWWVGVISKVLSNSRYVVYFRNTNEELELPHSEIRLHQDWINGKWVIASKALKL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2474 312 CDD Tudor_Agenet_AtDUF_rpt1_3 176 239 - -
Acco11g2474 312 Gene3D - 166 248 - -
Acco11g2474 312 MobiDBLite consensus disorder prediction 1 26 - -
Acco11g2474 312 CDD Tudor_Agenet_AtDUF_rpt1_3 15 83 - -
Acco11g2474 312 CDD Tudor_Agenet_AtDUF_rpt2_4 248 294 - -
Acco11g2474 312 SMART agenet_At_2 88 144 IPR014002 -
Acco11g2474 312 SMART agenet_At_2 174 242 IPR014002 -
Acco11g2474 312 SMART agenet_At_2 244 300 IPR014002 -
Acco11g2474 312 SMART agenet_At_2 13 86 IPR014002 -
Acco11g2474 312 Pfam Agenet domain 18 83 IPR008395 -
Acco11g2474 312 Pfam Agenet domain 179 239 IPR008395 -
Acco11g2474 312 Pfam Agenet domain 93 151 IPR008395 -
Acco11g2474 312 CDD Tudor_Agenet_AtDUF_rpt2_4 93 138 - -
Acco11g2474 312 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 170 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2474 Acco-ChrAcco11 37780056 37783562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2474 186 298 PHD Transcription Factor Family AT5G58610 29.851 2.60e-10 59.7