Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2462 ATGGATTCCGCAGGGACTGGTTTGCTGACCACTCTTATAGTCTTCCAGAACACCATTAAAGAAGAGCTGATCAGGAGCGTGCATGTCTACCGAATGAGGGATGGGAGGGAAAGCGAGATTGAAAGAGAGTTTGTATTTTCCCGGAGTGGCTCATACGAAGAAATGCGGGCTACCCCAATTCTTAGATTACAGAAATTTCGTGTTTCCAAAGTTTCTGTAGGGTATCAGAATGGAGTCTGGCTTTGTGTCTTTGCTTTTCACGCCGATCACAAGCCTCAGTGTTCCCACGTTCCTCGGTCGTTATCAGTCACGAGGAATCCCAAGCTTCAGATGATCCCAACATTGCTTAATGATCTCTGTATGATACATGAGCTGAACTGTAAATCAAAAGAGAATGATATGCTGCAAATCTCTCCCGATGAAAGATGCCAAGGAAACAGCAATGATAGCCATCAGCAAAGAAAAATTTTGCTCCAGGATCTCAATTGTCTTCCTTATCCAGATGGCATGCCTGAGTTACAAGACAAGGAAGTAGATGAAGAAAGTTTAGGTACGTCTGAGTTACCAGAAGAATCGGATGATGAAAGTTTAGACATAGCTGAGTTACCGGACAATGACATCATTGACGGAAGTTTTCCAGGTAACGTAGAGAAGAAAAAGAGAGCAGCCAGTAAAGATGTAGCAAGCATTAGTTTAGCAGATCTGGTGAAATTCTTTGATGTGCCTATTGTAGAAGCATCAAGAAATCTAAAAGTTGGACTTACTGTACTAAAGAGGAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATTAAATCGCTTGACAATCTCATTCATGATCTTCAGGAAGTGGCAGAAAATGAAGAAATGGAGAATGATGCTGCTGTTACGGCTGTGACCAAGAGGCAAAAGATGCTCGAGTGTGAAAAAGAAATAATTGAGAGGAAACCCTCCATGGACATACAAAGAGAAACCAAGAGATTCCGGCAGGATGTCTTCAAGAGAAGGCACAGGGCTAGAGCTATGACAAAACAGAGCGCCAGTGCCTGCAGCTCTTAG 1068 0.4326 MDSAGTGLLTTLIVFQNTIKEELIRSVHVYRMRDGRESEIEREFVFSRSGSYEEMRATPILRLQKFRVSKVSVGYQNGVWLCVFAFHADHKPQCSHVPRSLSVTRNPKLQMIPTLLNDLCMIHELNCKSKENDMLQISPDERCQGNSNDSHQQRKILLQDLNCLPYPDGMPELQDKEVDEESLGTSELPEESDDESLDIAELPDNDIIDGSFPGNVEKKKRAASKDVASISLADLVKFFDVPIVEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLQEVAENEEMENDAAVTAVTKRQKMLECEKEIIERKPSMDIQRETKRFRQDVFKRRHRARAMTKQSASACSS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2462 355 ProSiteProfiles RWP-RK domain profile. 212 297 IPR003035 -
Acco11g2462 355 Coils Coil 274 294 - -
Acco11g2462 355 MobiDBLite consensus disorder prediction 169 196 - -
Acco11g2462 355 Pfam RWP-RK domain 230 277 IPR003035 -
Acco11g2462 355 PANTHER PROTEIN RKD4 133 350 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2462 Acco-ChrAcco11 37696726 37701625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2462 19 355 AtRKD Transcription Factor Family AT4G35590 44.868 1.34e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Acco11g2462 RWP-RK 1.5e-19 No_clan