Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2454 ATGGTCATTCCCGATCACAACAATCCTAACCTAATCAAACCCACAAATTTCCAGGAAATGGGAACCAGGAAGTTTGGGAACAACAGAAGGGCGTTAAACGTGATAAATCAGAGTCTAGTGGAGGGTCGAGCTTATCCCTGCGTCGTTAACAAGAGGGGATTGCCTGATAAACATGAAATTTGTGAAAAGAAGCAGGCGGATCCAGTGCATCGACCGATCACCAGGAGATTTGCTGCTCAGATTGCTAGCACGCAACAAGCTCACGCTGAGGAAAATAAGAAGCCAAATACGGTAATTCCAAACGGGAATGACTTTGGAGATGTCATATTCATAGACGATGAACACAAGTCACCATCAGATCAGCCAGTGCCCATGTCATTGGAGAAAACAGAATCAACGCACGATGAAGTGGATCAGATGGAAGAAGTTGAGATGGAAGATATAATTGAAGAGTCTATAGTGGACATCGATTCTGGTGATGCCAATAATCCTCTGGCTGTCGTAGATTATGTTGACGAACTTCATGGCTACTACAGAGAAATGGAGAGTATTAGCTGTATCGCACCGAATTATATGGCACAGCAAGATGACATTAATGAAAGGATGAGGGCTATACTGATTGACTGGCTTATTGAGGTTCACGACAAATTTGACCTCATGCATGAGACTTTGTTCCTTACCGTTAATCTCATAGATAGGTTTTTGGCAAAGCAGAACGTGATCAGAAAGAAGCTTCAGCTGGTTGGCTTGGTTGCAATGCTTTTGGCATGCAAGTATGAGGAAGTTTCCGTGCCCGTGGTAGGGGATCTGATCCTTATATCGGACAAAGCTTACACAAGGAAGGAAGTTCTAGAAATGGAGAAGTTGATCCTGAAAACATTGCAGTTTAACGTGTCAGTGCCAACTCCATATGTTTTTATGAGGAGGTTCCTGAAGGCAGCTGAAGCAGATAAGAAACTTGAGCGAGCAGCTTTCTTCTTGATAGAGCTATCTCTTGTGGAATATGAGATGCTGAAGTTCCCACCGTCGATGCTAGCTGCAGCCGCAGTCTATGCAGCTCAATGTACTACTTATGGCTTCAAACAGTGGAGTAAGACATGCGAATGGCACACCAACTTCTCGGAAGATCAGCTTTTAGATTGCTCAAGGATGATGGTTGAGTTCCACCAGAAGGCAGGGACGGGAAAGCTTACAGGGGTATATAGGAAGTACTGCTCATCCAAATTCAGCCACATTGCAAAATTTGAGCCGGCAAGTTTTCTTCTGGAGAACGAGTTATAG 1281 0.4411 MVIPDHNNPNLIKPTNFQEMGTRKFGNNRRALNVINQSLVEGRAYPCVVNKRGLPDKHEICEKKQADPVHRPITRRFAAQIASTQQAHAEENKKPNTVIPNGNDFGDVIFIDDEHKSPSDQPVPMSLEKTESTHDEVDQMEEVEMEDIIEESIVDIDSGDANNPLAVVDYVDELHGYYREMESISCIAPNYMAQQDDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLAKQNVIRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLILKTLQFNVSVPTPYVFMRRFLKAAEADKKLERAAFFLIELSLVEYEMLKFPPSMLAAAAVYAAQCTTYGFKQWSKTCEWHTNFSEDQLLDCSRMMVEFHQKAGTGKLTGVYRKYCSSKFSHIAKFEPASFLLENEL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2454 426 PIRSF Cyclin_A_B_D_E 7 426 IPR046965 GO:0016538|GO:0044772
Acco11g2454 426 SMART cyclin_7 305 387 IPR013763 -
Acco11g2454 426 SMART cyclin_7 208 292 IPR013763 -
Acco11g2454 426 SUPERFAMILY Cyclin-like 300 419 IPR036915 -
Acco11g2454 426 Pfam Cyclin, N-terminal domain 176 298 IPR006671 -
Acco11g2454 426 Gene3D - 175 414 - -
Acco11g2454 426 SMART Cyclin_C_2 301 418 IPR004367 -
Acco11g2454 426 FunFam G2/mitotic-specific cyclin-1 289 413 - -
Acco11g2454 426 Gene3D - 187 299 - -
Acco11g2454 426 ProSitePatterns Cyclins signature. 203 234 IPR006671 -
Acco11g2454 426 Pfam Cyclin, C-terminal domain 301 417 IPR004367 -
Acco11g2454 426 SUPERFAMILY Cyclin-like 162 298 IPR036915 -
Acco11g2454 426 CDD CYCLIN_AtCycB-like_rpt1 150 296 - -
Acco11g2454 426 PANTHER CYCLINS 130 396 IPR039361 -
Acco11g2454 426 CDD CYCLIN_AtCycB-like_rpt2 301 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2454 Acco-ChrAcco11 37638440 37641602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2454 1 422 Core Cell Cycle Gene Families AT1G20610 57.044 5.87e-175 494