Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2437 ATGGGGATATCACAAAAATGGCGGAAAATAGTTGGTAGAAAATTCCTGGGCTCATCCAATAGAAGATATGTAATTATTCCCCGCAGAAGCACCGGCACAATTTGCTCAAATGAAAGCGATAAAGCCTTTCCCGGGAATGAAACGTCCACATTTGAAGAGCATGGCTTGCCGGTCTACACAAAAGAAGTCGCAGCAATTAAGATTCAGGCTTGTTTCAGGGGTCACCTGGTATCTGAGAAATGGATGAATGAACAGGCAAGAAGGGCATATCGAGCTCTTAGAAGTCTGGTGAAGCTGCAAGCACTGGTTCGTGGGGTATTCGTAAGGAGACAATCGCGCGTAGCGTTGCACTGTATGCATTTACTCGTTCGCTTACAGGTCAGGATCCGTGCAAGGCAGCTTCTTGGCGGATCTCTCCCTCACTGA 426 0.4718 MGISQKWRKIVGRKFLGSSNRRYVIIPRRSTGTICSNESDKAFPGNETSTFEEHGLPVYTKEVAAIKIQACFRGHLVSEKWMNEQARRAYRALRSLVKLQALVRGVFVRRQSRVALHCMHLLVRLQVRIRARQLLGGSLPH 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2437 141 PANTHER IQ-DOMAIN 5-RELATED 50 133 - -
Acco11g2437 141 SMART iq_5 60 82 IPR000048 GO:0005515
Acco11g2437 141 SMART iq_5 91 113 IPR000048 GO:0005515
Acco11g2437 141 Gene3D - 60 118 - -
Acco11g2437 141 ProSiteProfiles IQ motif profile. 94 120 IPR000048 GO:0005515
Acco11g2437 141 Pfam IQ calmodulin-binding motif 64 77 IPR000048 GO:0005515
Acco11g2437 141 Pfam IQ calmodulin-binding motif 94 111 IPR000048 GO:0005515
Acco11g2437 141 ProSiteProfiles IQ motif profile. 61 89 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2437 Acco-ChrAcco11 37519535 37520036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2437 61 136 IQD Protein Family AT3G51380 67.105 4.28e-28 98.2