Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2429 ATGGCATCAAAAGAAGACAAAAGACGTCAGCGGGTCACTTCTCACCCTCTCAATCCATTTTCACTAGCGGTTTCCCGTCGCATCTCAACCTCTAGTCCTCTGCTCGGCTCTCGCCTCTTTTTTTCCCTTCTCCATTTTTATTCTCTCCCTGTCTCGTTTTGGGACACTCTGAGTATACTTAAAGTTACACTTGCCTCGGAATACAGTTCTCGGGGCGCAATGGCCGACGATGTTTCCGTCAAACGGATCTATCTTCACGGGGATTTGGACTTAAAAATTATCGAGGCTCGAATGTTGCCCAATATGGACCTTGTATCTGAGCGCTTCCGCCGTTGCTTCTCCGCATGTGATACTATACACTTCCATTCATCCGATCCCGCTGCCCCGGCGGACGACGGAGGCCACCGCAAAACTCACCAACATAAAAAGATCATTACCAGCGACTCTTATGTGACGGTTGTGGTCCCACAAGCCACTGTTGCCCGCACACGTGTCATCAAGAATTCTCAAAACCCTCGCTGGGACGAGCACTTCAACATCCCCTTGGCACACCGCATCGTAAATTTGGAATTCCGCGTGAAAGATGACGACATTTTTGGTGCGCAACTCATCGGAACTGTTAAAATTCCGGCGCAGGATATTGCTTCCGGTGTACCTATTAGCGGGTGGTTCCCAATTCTTGGATCCTCCGGTAAGCAACCCAAACGCGACACTTCGCTTCATATTGAAATGACGTTCACACCAGTCGAGAAGAACCCACTGTATCTTCGCGGCATTGCGAACGACCCCGAGCACAAGGGTGTGAGACACGCGTATTTTCCGTTGCGGAAAGGTAGCTCCGTGAGACTGTACCAAGATGCCCATGTTCCTGAAGGAATGCTGCCTAAGATTGAGCTAGAGGGAGGGAAGGTTTATAGGCATGAAAAATGTTGGGAAGATATTTGTTATGCTATATCTGAGGCTCATCATATGGTATATCTCGTGGGCTGGTCAATCTACCACAAGGTAAAACTGGTTAGGGAGCCTTCCAGACCATTGCCACGAGGTGGAGATTTAAATCTTGGTGAATTGCTCAAATACAAGTCTCAAGAAGGGGTTCGAGTTCTGTTACTGGTCTGGGATGATAAAACTTCCCACGATAAGCTGTTCTTCAAGTCGGCTGGAGTAATGCAGACACATGATGAAGAGACTAGAAAGTTCTTTAAGCATTCTTCCGTTATGTGTGTATTAGCACCTCGGTATGCTAGCAGCAAATTGAGTATTCTAAAGCAACAGGTTGTTGGAACTGTCTTCACACACCACCAAAAATGTGTTATTGTGGACACACAGGCCTCTGGTAATGATAGGAAAATAACTGCTTTTTTAGGAGGGCTTGATCTATGTGATGGTCGCTATGACACACCTGAACATAGACTTCTTCGTGGTCTTGATACTGTGTTTTCGGGGGATTTCCACAATCCTACATTTCCTGCTGGAAAGAGGGCTCCGAGGCAACCATGGCATGATTTGCATTGTAGAATTGATGGGCCTGCTGCATATGATGTTCTTATTAATTTTGAGCAGCGTTGGAGAAAAGCAACTAAGTGGAGAGAGTTTGCAATGCTTGTAAAAAAGGCTTCTCATTGGCATGATGATGCTTTGATAAAATTAGATCGCATATCATGGATATTAAGTCCTTCCGTGTCTCCCTCAAAGGATGGTAGTACAACTGTACCTGGAGATGACCCTACAGTGTGGGTTTCCAGGGAGGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGAATCCGGGTCCCTGAAAGGGTTTCCAAAAAATGTTCATGATGCCCTGTCCCAGAATCTTATCTGCGCTAAAAATTTGGTAATAGATAAAAGCATTCAAACAGGATACATCCAGGCGATCAGATCTGCTCAACATTTTATTTACATAGAAAACCAATACTTTATTGGATCGTCGTATGCATGGCCCTCTTATAAAGATGCAGGTGCTGATAATCTTATCCCAATGGAATTGGCGCTGAAAATTGCTAATAAAATCAAAGCTAAGGAAAGATTTGCAGTGTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCTAATTCTGCAGCTGTGCAAGAAATTCTGTATTGGCAGAGCCAGACAATGCAGGCGATGTATAATGTTGTGGCTGAAGAATTGAAATCAATGCAACTTACTGACTTGCATCCACAAGATTACCTCAACTTCTATTGCCTTGGTAATCGAGAGGAATTTCATGAAGATGCCTTGAACTCTAATGGTGATGCTGTCACTGATTCATATAAGTACGGCCGCTTCATGATTTATGTACATGCTAAAGGGATGATCATTGATGATGAGTATGTGATAGTGGGGTCTGCTAATATAAACCAAAGATCTATGGCTGGTACAAAAGATACAGAGATAGCAATGGGTGCGTACCAACCACATCACACTTGGTCTGCAAGGAAAAGGCATCCCTTTGGCCAGATTTATGGTTACAGAATGTCTCTGTGGAGTGAGCATCTGGGGCTTGAGGGGATAGAAACATGTTTCAAGGAACCGGAGAGTTTGGAATGTGTCAAGAAAGTGAATGAAATTGCCAACACAAACTGGAGCAAGTTCACTTCTGAGAACTTCTCACAGCTGCAGGGGCATTTGCTCAAGTATCCTGTACAGGTAGATGCTGATGGGAAAGTGAGCTCACTACCCGGACATGAGAATTTCCAGGATGTTGGCGGCAAAGTACTGGGGGCTTATTCCCAAACAATGCCAGATATCCTAACAACGTAA 2799 0.4484 MASKEDKRRQRVTSHPLNPFSLAVSRRISTSSPLLGSRLFFSLLHFYSLPVSFWDTLSILKVTLASEYSSRGAMADDVSVKRIYLHGDLDLKIIEARMLPNMDLVSERFRRCFSACDTIHFHSSDPAAPADDGGHRKTHQHKKIITSDSYVTVVVPQATVARTRVIKNSQNPRWDEHFNIPLAHRIVNLEFRVKDDDIFGAQLIGTVKIPAQDIASGVPISGWFPILGSSGKQPKRDTSLHIEMTFTPVEKNPLYLRGIANDPEHKGVRHAYFPLRKGSSVRLYQDAHVPEGMLPKIELEGGKVYRHEKCWEDICYAISEAHHMVYLVGWSIYHKVKLVREPSRPLPRGGDLNLGELLKYKSQEGVRVLLLVWDDKTSHDKLFFKSAGVMQTHDEETRKFFKHSSVMCVLAPRYASSKLSILKQQVVGTVFTHHQKCVIVDTQASGNDRKITAFLGGLDLCDGRYDTPEHRLLRGLDTVFSGDFHNPTFPAGKRAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATKWREFAMLVKKASHWHDDALIKLDRISWILSPSVSPSKDGSTTVPGDDPTVWVSREDDPENWHVQIFRSIESGSLKGFPKNVHDALSQNLICAKNLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIANKIKAKERFAVYIVLPMWPEGDPNSAAVQEILYWQSQTMQAMYNVVAEELKSMQLTDLHPQDYLNFYCLGNREEFHEDALNSNGDAVTDSYKYGRFMIYVHAKGMIIDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHHTWSARKRHPFGQIYGYRMSLWSEHLGLEGIETCFKEPESLECVKKVNEIANTNWSKFTSENFSQLQGHLLKYPVQVDADGKVSSLPGHENFQDVGGKVLGAYSQTMPDILTT 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2429 932 Pfam Phospholipase D Active site motif 429 464 IPR001736 GO:0003824
Acco11g2429 932 SMART pld_4 429 464 IPR001736 GO:0003824
Acco11g2429 932 SMART pld_4 775 802 IPR001736 GO:0003824
Acco11g2429 932 Gene3D Endonuclease Chain A 298 546 - -
Acco11g2429 932 SMART C2_3c 88 223 IPR000008 -
Acco11g2429 932 Gene3D Endonuclease Chain A 588 824 - -
Acco11g2429 932 Pfam PLD-like domain 634 812 IPR025202 -
Acco11g2429 932 SUPERFAMILY Phospholipase D/nuclease 626 822 - -
Acco11g2429 932 Gene3D C2 domain 86 258 IPR035892 -
Acco11g2429 932 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 429 464 IPR001736 GO:0003824
Acco11g2429 932 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 85 249 IPR035892 -
Acco11g2429 932 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 775 802 IPR001736 GO:0003824
Acco11g2429 932 FunFam Phospholipase D delta 301 545 - -
Acco11g2429 932 Pfam C2 domain 87 226 IPR000008 -
Acco11g2429 932 CDD C2_plant_PLD 81 247 - -
Acco11g2429 932 PANTHER PHOSPHOLIPASE D 82 920 IPR015679 -
Acco11g2429 932 PIRSF PLD_plant 74 932 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco11g2429 932 SUPERFAMILY Phospholipase D/nuclease 272 534 - -
Acco11g2429 932 ProSiteProfiles C2 domain profile. 70 224 IPR000008 -
Acco11g2429 932 Pfam Phospholipase D C terminal 852 921 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2429 Acco-ChrAcco11 37456425 37466234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2429 74 766 Phospholipase D Gene Family (Wang group) AT4G35790 70.977 0.0 1047