Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2393 ATGCCAGTTTATTGGAATGGCTATTTTATCTGTTTTCCCTTAAAAATACATGGAAATGTTTCACATGTTTATTACTATATTTTAATTTTCCAAGTCAATGGTCTCCCAGGAACGTTGAAACTGAATGCAGAAATGGTGGAAGAAAATATCGATGGAAGATCCTTGGCTGAAACCTCCACTTGGGCAGTTGCAACTGTCATCACTCATCACTCTATTGGTTGCTATAAAACCAAGAGAAAATTTCTGCTTGCTGCCATGGAAAAGATCAAAGAAGCAGAGCTAATGCTTTTTGGGTTGCTTTCATTGCTGATGGGTCATTGGATTATTTATGTGGCGAAGGTTTGTGTCAAGTCTTCGGTTTTAAGCAGCAAGTTTTTCCCGTGTGCGGTGCAAGGCAATTCTCCAATCCGTTCAAATTTAGAGCATCGTAATATGACAGTTTTCAAAGAGCATGTGAATTTTAAGCTGCATAATTATTGCCCTGAGGGTCACGAGTCATTTGCTTCTTATAACAGCCTCGAGCAGCTTCATCGTTTCACGTTTGTCTTGGGGATTACTCATGTTTCCTACAGTTTTGCTGCTATTGCCTTGGCCATGATTAAGGGTAGATCCTTCACAGGTTACATCAAATGCAAGATTTCGATGGCTCTCTACGTTCATTGTTCACCAGACATCTCATCCCTGGAGTCAGCACAAAGTTCTTGTTTGGCTGGTACTGCATATCTATGTTTCAGCCGCCAATTCTGGAGTTCCATCAACCTAGCTGATTACATGGCATTGCGTTTAGGTTTTGTTACTACTCACCAGCTTCCCCTGACATATGATTTCCAAAACTACATTCTTCAAAGCATGGATGATGAGTTCCGTGACATTGTTGGTGTTAGTGTGCCTCTCTGGATATATGCCAGTTGTTGCATTTTCCTAGATTTTCACGGAAGCCACTTCTACTTTTGGCTTTCCTTCATTCCAGCAATTTTGATCCTGGTAATTGGTACTAAACTTCATCGGGTGGTGGTAAAGTTGGCTGTGGAGATAATGGACCGTTGCCCATATATGAAGCACACTCAATTCAACTCAAGAGATGAGCTCTTCTGGTTTGGGAAGCCTAGGCTTCTTCTGTGGTTGATACAGCTCATATCCTTCTTGAATGCATTTGAAATGGCATCGTTCATATGGTCACTTGGTCATCTGCCAGATTTGGTGCAGCTTCGTAACGTTTCCTCTATGGGGTCACGGTTCAAGAAATCGGTGATATCTGAGAATGCAAGAAAGTCACTCTCGAAATGGCAGAGGAGAGTGAAGGGTAGACAAAGTCCCTCTGCTTCACTCCTGGGAGCAACACCAACAACATCAGTTACAAGTTACAACGTTGTCCGGCGTGGTGAATTCAAGTTTCAATGCAATAAACAGTGGGGAAGGAAGCTCCTCTGGAATAAAGGACTCTGGCAATCCCTGCGAGCAAACCTCATTTCTGAACATTTTATAAACTGGCTCCAAGCTTCCGACTCCATACAGGGTCAGTTCCTCCTAAGACCTACGACGATGGTGCTCGAGGCAACAATGATCTGTATTGACAATTCTGAATGGATGCGTAATGGAGATTATGCACCTTCTCGATTTCAAGCTCAAGCAGATGCTGTCAATCTTATCTGCGGTGCTAAAACACAGGCTAATCCAGAGAATACAGTCGGAGTTCTCACAATGGCAGGGAAGGGAGTTCAGGTTTTGGTGACTCCAACCAGTGATCTGGGCAAGATCTTAGCTTGCATGCATGGACTAGAAATAGGTGGGGAAATGAACCTAGCCGCTGCTATTCAAGTGGCTCAATTGGCTCTGAAGCATCGGCAAAATAAGAAACAGCAGCAAAGAATTATTGTTTTTGCTGGAAGTCCTGTCAAGCATGAGAAGAAGATGCTGGAGATGATTGGGAGAAAACTTAAAAAGAACAGTGTAGCCCTTGACATTATCAATTTTGGTGAAGAAGAAGATGGCAAGACTGAAAAGCTGGAAGCACTTCTTGCAGCCGTTAATAATAATGATACAAGTCACAATGTCCATGTTCCAGCTGGTCCCAATGCTCTTTCTGATGTGCTTATAAGTACACCTATTTTTACTGGGGATGGGGAAGGTGGAAGTGGCTTCGCTGCTGCAGCAGCTGCAGCTGCAGCTGGGGGTGTATCTGGTTTTGAGTTTGGTGTGGATCCAAACTTGGATCCTGAGCTGGCTCTTGCTTTAAGAGTTTCAATGGAAGAGGAGAGGGCCAGACAGGAGGCAGCAGCAAAAAAGGCTGCTGAGGATGCTGCCAAACAGGAGAAAGGAGGTGATGAGCAAGCCAGTTCACAAGATGCAACAATGACTGAGCGAACCAGTGCTGCAACATCTGAAGCTGATAACAAGACAAATGATTTGATGGATGATGAGAATGCTCTCCTGCAGCAAGCACTTGCAATGTCAATGGATGATCCTGCCATTAACCATGACTTAAGAGATACAGATATGTCAGAAACAACTGCAGAAGATCCTGATTTGGCCCTTGCTCTTAAATTGTCGGTAACAGACAATACAAAGGACTCAGCAAGCCAGTCAGACATGAGTAAATTGTTGGCTGATCAGTCCTTCGTATCTTCTATCCTTGCTTCACTTCCTGGGGTTGACCCAAATGACCCATCTGTCAAAGATCTGCTGGCCTCCATGCAAAGTCAGTCTGAGCCCCAGCAGAAGAATGAAGATAAGCCGCCAAATGAGGAGGAAAAGAAATAA 2760 0.438 MPVYWNGYFICFPLKIHGNVSHVYYYILIFQVNGLPGTLKLNAEMVEENIDGRSLAETSTWAVATVITHHSIGCYKTKRKFLLAAMEKIKEAELMLFGLLSLLMGHWIIYVAKVCVKSSVLSSKFFPCAVQGNSPIRSNLEHRNMTVFKEHVNFKLHNYCPEGHESFASYNSLEQLHRFTFVLGITHVSYSFAAIALAMIKGRSFTGYIKCKISMALYVHCSPDISSLESAQSSCLAGTAYLCFSRQFWSSINLADYMALRLGFVTTHQLPLTYDFQNYILQSMDDEFRDIVGVSVPLWIYASCCIFLDFHGSHFYFWLSFIPAILILVIGTKLHRVVVKLAVEIMDRCPYMKHTQFNSRDELFWFGKPRLLLWLIQLISFLNAFEMASFIWSLGHLPDLVQLRNVSSMGSRFKKSVISENARKSLSKWQRRVKGRQSPSASLLGATPTTSVTSYNVVRRGEFKFQCNKQWGRKLLWNKGLWQSLRANLISEHFINWLQASDSIQGQFLLRPTTMVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQANPENTVGVLTMAGKGVQVLVTPTSDLGKILACMHGLEIGGEMNLAAAIQVAQLALKHRQNKKQQQRIIVFAGSPVKHEKKMLEMIGRKLKKNSVALDIINFGEEEDGKTEKLEALLAAVNNNDTSHNVHVPAGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDAAKQEKGGDEQASSQDATMTERTSAATSEADNKTNDLMDDENALLQQALAMSMDDPAINHDLRDTDMSETTAEDPDLALALKLSVTDNTKDSASQSDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQSQSEPQQKNEDKPPNEEEKK 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2393 919 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 515 911 IPR027040 GO:0006511|GO:0008540
Acco11g2393 919 MobiDBLite consensus disorder prediction 777 798 - -
Acco11g2393 919 CDD VWA_26S_proteasome_subunit 515 702 - -
Acco11g2393 919 Gene3D - 734 820 - -
Acco11g2393 919 ProSiteProfiles VWFA domain profile. 519 703 IPR002035 -
Acco11g2393 919 CDD PSMD4_RAZUL 859 903 - -
Acco11g2393 919 FunFam 26S proteasome regulatory subunit N10 734 820 - -
Acco11g2393 919 MobiDBLite consensus disorder prediction 893 907 - -
Acco11g2393 919 SMART uim 806 825 IPR003903 -
Acco11g2393 919 SMART uim 736 755 IPR003903 -
Acco11g2393 919 SMART uim 838 857 IPR003903 -
Acco11g2393 919 MobiDBLite consensus disorder prediction 756 776 - -
Acco11g2393 919 Gene3D von Willebrand factor, type A domain 517 700 IPR036465 -
Acco11g2393 919 Pfam Mlo family 53 394 IPR004326 GO:0006952|GO:0016020
Acco11g2393 919 Pfam von Willebrand factor type A domain 520 629 IPR002035 -
Acco11g2393 919 FunFam 26S proteasome non-ATPase regulatory subunit 4 517 700 - -
Acco11g2393 919 SMART VWA_4 516 689 IPR002035 -
Acco11g2393 919 MobiDBLite consensus disorder prediction 879 919 - -
Acco11g2393 919 Pfam Ubiquitin interaction motif 806 821 IPR003903 -
Acco11g2393 919 Pfam Ubiquitin interaction motif 738 751 IPR003903 -
Acco11g2393 919 Pfam Ubiquitin interaction motif 839 850 IPR003903 -
Acco11g2393 919 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 736 755 IPR003903 -
Acco11g2393 919 Coils Coil 746 771 - -
Acco11g2393 919 MobiDBLite consensus disorder prediction 756 802 - -
Acco11g2393 919 SUPERFAMILY vWA-like 518 693 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2393 Acco-ChrAcco11 37212958 37227728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2393 51 443 MLO family AT1G11000 41.575 6.19e-85 282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2393 11 37212958 37227728 Acco11g2393 11 37212958 37227728 ECH