Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2385 ATGCTCGGTCCCGTTATAAATACCACCCCGATTTCTTCTTTTGCCTCCGCCCAAGTCTCGCCCCACAAATACGACATCGTGTTGCACCGTAACATGCTCCCTCTTTCACGCCCTGCCCCTCTTCCCACCATAGGTTTCTCTGTATCCTCTTCGCCCCCAACGTCGCCTCACCGTCTTCCAATCCGGCCGATCGTCGCCTCCGCCACCGCGACAGAATCTTGCTCCACTTGGACTGAGCAACCGAAATCGAGGTCCTCCTATCTCAGCTCCCTTACTATGTCTTCGTTGACGTCGCTGTACGAGATTCTAGGGATTCCGGCGGGCGCGTCCCATCAAGAGATTAAGGCGGCTTACCGTCGATTGGCGAGGGTGTGCCATCCGGATGTGGCGGCGGTGGGTCGGAAGGATTCGTCGGCCGACGAGTTTATGAAGATTCACGCCGCGTACTCCACTCTGTCGGACCCCCAAAAGCGCGCCACCTACGACAAGAGCCTCTTCGTCCGTCGACAGAGGCCTTTGTCCACGGCGTCTTCGTATTCCGGTTACAGTGGCCGGAACTGGGAAACTGACCAGTGTTGGTAG 582 0.5756 MLGPVINTTPISSFASAQVSPHKYDIVLHRNMLPLSRPAPLPTIGFSVSSSPPTSPHRLPIRPIVASATATESCSTWTEQPKSRSSYLSSLTMSSLTSLYEILGIPAGASHQEIKAAYRRLARVCHPDVAAVGRKDSSADEFMKIHAAYSTLSDPQKRATYDKSLFVRRQRPLSTASSYSGYSGRNWETDQCW 193
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2385 193 SUPERFAMILY Chaperone J-domain 92 168 IPR036869 -
Acco11g2385 193 Pfam DnaJ domain 99 162 IPR001623 -
Acco11g2385 193 ProSiteProfiles dnaJ domain profile. 98 165 IPR001623 -
Acco11g2385 193 CDD DnaJ 100 154 IPR001623 -
Acco11g2385 193 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 46 189 - -
Acco11g2385 193 ProSitePatterns Nt-dnaJ domain signature. 142 161 IPR018253 -
Acco11g2385 193 PRINTS DnaJ domain signature 100 118 IPR001623 -
Acco11g2385 193 PRINTS DnaJ domain signature 118 133 IPR001623 -
Acco11g2385 193 PRINTS DnaJ domain signature 137 157 IPR001623 -
Acco11g2385 193 Gene3D DnaJ domain 84 184 IPR036869 -
Acco11g2385 193 SMART dnaj_3 97 157 IPR001623 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco11g2385 Acco-ChrAcco11 37154701 37155282 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2385 88 162 C2H2 Transcription Factor Family AT1G74250 41.026 6.39e-10 55.8
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2385 11 37154701 37155282 Acco11g2385 11 37154701 37155282 ECH