Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2383 ATGGATCAGTGGAAACCTGAAGATTTGTCTAAATCTGCATCTGTTGCAGCAGATTTGGCGCCTTCTTCTCTACAGCCTCAGTCGCGACTTGTTACCGTCACCTGTAACCGCTTGCAGAATTCGCATACCGAATCCAGGCAGAGGCCTGAAGCTGAAGGACAGGATCCAGTTGCTGCAAGAAAATTTCAGAAGGCAGACCGTGAGAAACTGAGGAGGGATCGACTAAATGAACATTTCCTAGAGCTGGGAAACACATTAGATCCAGATAGGCCAAAGAATGACAAGGCTACTATCCTTACGGACACAATTCAGGTGCTTAAAGATTTAACTGCTGAAGTCAATAAACTAAAAGCTGAGCATGCTGCACTTTCTGAAGAATCACATGAACTAATGCAGGAGAAAAATGAACTCAGAGAAGAGAAGATCTCTTTAAAATCTGACATTGAAAATCTTAATGCACAGTATCAGCAGAGAGTGAGAGTCACATTCCCATGGACTGCAATCGATCATTCAGTTGTCATGGCTCCCCCGTATTCATATCCAGTTCCTATACCCATTCCTTCCGCTCCAATTTCCATTCATCCGTCTCTTCAGCCTTTTCCTTTCTTTGGAAACCAAAATCCTTGTTCCACATATGTCCCCTTTTCTGCTTCTGCTAATCCCCCAGTCGAGCAGCCAACTGGCCAATATGCTTCGACGTTCAGCGCTTCAAGCAAACAAGATTCCAGAAGTAAGTTGCCAGATCATGAAAGGACTGGCAATGCCGAAAGATGCGGTGAATCTAACGATGTAGCCACAGAGCTTGAACTTAAGATGCCTGGATCATCATCGCGGCAGGAATCATCTTCTGGAGCAAGGAAGGGCAAGCATTCATCAAGGAAGGAGAGAAATATCACAGATGGGAGTACTTCAAGCAGGCATTCTTCATCACAAGGACCTCAAGATAGCTCCAACAGCGTGTGTGACATCCCGAAGTCTGATAAATCATAA 990 0.4485 MDQWKPEDLSKSASVAADLAPSSLQPQSRLVTVTCNRLQNSHTESRQRPEAEGQDPVAARKFQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKATILTDTIQVLKDLTAEVNKLKAEHAALSEESHELMQEKNELREEKISLKSDIENLNAQYQQRVRVTFPWTAIDHSVVMAPPYSYPVPIPIPSAPISIHPSLQPFPFFGNQNPCSTYVPFSASANPPVEQPTGQYASTFSASSKQDSRSKLPDHERTGNAERCGESNDVATELELKMPGSSSRQESSSGARKGKHSSRKERNITDGSTSSRHSSSQGPQDSSNSVCDIPKSDKS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2383 329 Gene3D - 58 138 IPR036638 GO:0046983
Acco11g2383 329 MobiDBLite consensus disorder prediction 43 68 - -
Acco11g2383 329 CDD bHLH_AtILR3_like 64 138 - -
Acco11g2383 329 MobiDBLite consensus disorder prediction 223 329 - -
Acco11g2383 329 SMART finulus 65 115 IPR011598 GO:0046983
Acco11g2383 329 MobiDBLite consensus disorder prediction 242 257 - -
Acco11g2383 329 MobiDBLite consensus disorder prediction 223 241 - -
Acco11g2383 329 MobiDBLite consensus disorder prediction 283 301 - -
Acco11g2383 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 109 IPR011598 GO:0046983
Acco11g2383 329 Coils Coil 99 154 - -
Acco11g2383 329 PANTHER TRANSCRIPTION FACTOR BHLH121 32 326 IPR044579 GO:0003700|GO:0006879
Acco11g2383 329 MobiDBLite consensus disorder prediction 1 25 - -
Acco11g2383 329 Pfam Helix-loop-helix DNA-binding domain 64 109 IPR011598 GO:0046983
Acco11g2383 329 MobiDBLite consensus disorder prediction 38 68 - -
Acco11g2383 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 130 IPR036638 GO:0046983
Acco11g2383 329 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2383 Acco-ChrAcco11 37142007 37145092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2383 57 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 54.878 2.02e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco11g2383 HLH 1.5e-08 No_clan