Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2382 ATGGGCATCTGCTTCTCTTCCACGAAAGTCTGTGGCTCCAACAGCAATACCACGGCCAACGGCGCCACCGCTGTCCACCACAATCGCAACCCCAAGCCTCAATCCCGCACGACCACGGTTAAATCTCAAGCGACGAACGATCAACGGCCTAAAGTACGGAATGAGATCCGTAACGCTCAGCCGAACAAGAATTCCCAGCAGCCCAAGACCAAAGACAAGCAACATCCCAAACGACAGCCGTGCGGGAAAAGGACCGATTTTGGCTATGAAAAGGATTTCGACGCGCGTTACTCGCTCGGAAAATTGCTGGGACATGGTCAATTTGGTTACACATATGTTGGAGTGGACCTAGCGAATGGGGATCGGGTGGCTGTGAAAAGAATTGACAAGAGTAAGATGATTCTCCCGATTGCCGTTGAGGATGTTAAACGAGAGGTAAAGATTTTGAAAGAACTCGCTGGGCACGAGAATGTGGTTCAGTTCTACAATGCTTTTGAGGACGATTCATATGTATATATTGTTATGGAGTTATGCGAGGGTGGAGAACTATTAGATCGTATATTGTCCAAGAAAGACAGCCGTTATACAGAAAAAGATGCCGCAGTGGTTGTAAGGCAGATGCTCAAAGTTGCAGCCGAGTGTCATTTGCATGGTTTGGTCCACCGGGACATGAAACCAGAGAATTTTCTTTTTAAATCAACTAAAGCAGATTCACCTTTGAAGGCTACAGATTTTGGTTTGTCAGATTTTATTAAACCTGGAAAGAAGTTTCATGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTGAAGCGCAAGTCAGGCCCAGAATCAGATGTATGGAGTATTGGTGTAATTACATACATATTGCTTTGTGGGAGGCGCCCATTTTGGGATAAGACAGAGGATGGTATCTTTAAGGAGGTATTACGTAATAAGCCTGACTTCCGGCGGAAACCATGGCCATCTATAAGTAGTGCTGCAAAAGATTTTGTAAAGAAATTGCTAGTAAAGGATCCTCGGGCTAGATTTACTGCTGCCCAGGCTTTATCTCTTCCATGGGTTAGGGAAGGAGGGGAGGCGTCAGAGATTCCTATCGACATATCTGTCCTTAGCAATATGCGGCAATTTGTGAAATTTAGTAGGTTGAAACAATTTGCACTCAGGGCTCTAGCTAGCACACTTAATGAAGAAGAGTTGGCTGATCTCAGAGATCAGTTTGATGCAATTGATGTGGACAAAAGTGGCGCTATTAGTCTAGAAGAGATGAGACATGCCCTAGCTAAGGATATCCCTTGGAAGTTGAAAGATTCCCGTGTTCTTGAGATATTACAAGCGATAGATAGTAACACTGATGGGCTTGTGGATTTCTCTGAGTTTGTGGCTGCTACATTACACGTACATCAATTGGAGGAGCACGACTCAGAAAAGTGGCTTCACCGGTCACAAGCTGCTTTTGAGAAATTTGATATAGACAAGGATGGCTATATTACTTCAGAAGAACTTAGATTGCATACGGGCTTACGGGGATCCATTGATTCGCTACTTGAGGAAGCTGATATCGACAAAGATGGAAAAATCAGCCTCCCAGAGTTTCGAAGACTCCTAAGAACTGCAAGCATTAGTTCACATACCGTGACAACCCCACGGGGGATGTTAGATTAG 1671 0.447 MGICFSSTKVCGSNSNTTANGATAVHHNRNPKPQSRTTTVKSQATNDQRPKVRNEIRNAQPNKNSQQPKTKDKQHPKRQPCGKRTDFGYEKDFDARYSLGKLLGHGQFGYTYVGVDLANGDRVAVKRIDKSKMILPIAVEDVKREVKILKELAGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKADSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISSAAKDFVKKLLVKDPRARFTAAQALSLPWVREGGEASEIPIDISVLSNMRQFVKFSRLKQFALRALASTLNEEELADLRDQFDAIDVDKSGAISLEEMRHALAKDIPWKLKDSRVLEILQAIDSNTDGLVDFSEFVAATLHVHQLEEHDSEKWLHRSQAAFEKFDIDKDGYITSEELRLHTGLRGSIDSLLEEADIDKDGKISLPEFRRLLRTASISSHTVTTPRGMLD 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2382 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Acco11g2382 556 MobiDBLite consensus disorder prediction 15 86 - -
Acco11g2382 556 ProSitePatterns EF-hand calcium-binding domain. 492 504 IPR018247 -
Acco11g2382 556 Pfam EF-hand domain pair 404 466 IPR002048 GO:0005509
Acco11g2382 556 Pfam EF-hand domain pair 486 538 IPR002048 GO:0005509
Acco11g2382 556 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
Acco11g2382 556 Pfam Protein kinase domain 97 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2382 556 SMART efh_1 513 541 IPR002048 GO:0005509
Acco11g2382 556 SMART efh_1 404 432 IPR002048 GO:0005509
Acco11g2382 556 SMART efh_1 483 511 IPR002048 GO:0005509
Acco11g2382 556 SMART efh_1 441 469 IPR002048 GO:0005509
Acco11g2382 556 Gene3D - 398 467 - -
Acco11g2382 556 Gene3D - 379 537 - -
Acco11g2382 556 ProSitePatterns EF-hand calcium-binding domain. 522 534 IPR018247 -
Acco11g2382 556 SMART serkin_6 97 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2382 556 MobiDBLite consensus disorder prediction 68 86 - -
Acco11g2382 556 MobiDBLite consensus disorder prediction 15 47 - -
Acco11g2382 556 CDD STKc_CAMK 96 356 - -
Acco11g2382 556 FunFam Calcium-dependent protein kinase 28 398 467 - -
Acco11g2382 556 SUPERFAMILY Protein kinase-like (PK-like) 96 370 IPR011009 -
Acco11g2382 556 SUPERFAMILY EF-hand 386 540 IPR011992 -
Acco11g2382 556 ProSiteProfiles EF-hand calcium-binding domain profile. 479 514 IPR002048 GO:0005509
Acco11g2382 556 FunFam calcium-dependent protein kinase 28-like 183 376 - -
Acco11g2382 556 PANTHER SERINE/THREONINE-PROTEIN KINASE 74 526 - -
Acco11g2382 556 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Acco11g2382 556 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Acco11g2382 556 ProSiteProfiles Protein kinase domain profile. 97 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2382 556 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Acco11g2382 556 FunFam CDPK-related kinase 1 90 182 - -
Acco11g2382 556 Gene3D Phosphorylase Kinase; domain 1 90 182 - -
Acco11g2382 556 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
Acco11g2382 556 Gene3D Transferase(Phosphotransferase) domain 1 183 378 - -
Acco11g2382 556 ProSiteProfiles EF-hand calcium-binding domain profile. 515 544 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2382 Acco-ChrAcco11 37130558 37140689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2382 1 555 EF-hand Containing Proteins AT2G17890 74.523 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco11g2382 Pkinase 2.6e-67 CL0016