Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2377 ATGGAAACCCAGCAGCAGCAGCAGCAGCAGGAGGAAGGTGGAGGAAATAGAGGAGGGTATATGTGCAGGCAAAGCAGTACAAGGTGGACGCCCACAAGTGACCAGATAAGGATACTGAAGGACCTTTATTACAACAATGGAGTTAGGTCCCCAAATGCTGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGCAAGATTGAAGGCAAGAACGTCTTTTACTGGTTCCAGAACCACAAGGCCCGTGAACGCCAGAAGAAACGCTTCACTACTACTACTACTTCCTCCTCTGATCTTCATCCCCCCTCCACTCCCATGCATTTCCACAATAGACCTCCTCCTCCTCCCACTCCTACTACCAACAATATCCCTCCACCTCCTAATAATTGGAAGCCTGATCACGAACCCAATATTCTTCACCCCAAGCATTCTAACATACCACCAACTCACGGCGTTTCTTCTGCTTCTGGGATGGTCGCTATGGGCCAGATGGGGAACTATGGCTATGGATCTGTCACTATGGAGAAGTGTTTTAGAGACTGCTCAATATCAGCAGGAGGAAGCAGTGGTACCATAAGCCACCAGAATTTGGGATGGGTAGGTATGGATCCGTACGCAAACTACAGTAACTTATTGGACAAAATAAGGCCTGGAGATCAAGAAACCCTGAAAGATGAACATGATGGGGAAGATGATGGAGCCCCTGAGATTGAAACCCTCCCCCTGTTTCCCATGCACGGCGAGGACATCCACGGCTACTGCAACCTCAGGTCTGATTCTTCTTCTTACTATGCCGGTGGCTGGTATCATCACGCCGCCGCCGATGAATATGCCTTCAAGAACGTCGTCAATGGCTCTCACCACCGTACTTCCCTCGAGCTCACTCTCAACTCCTACACCCGCAGATCTCCAGATTCAACTTGA 930 0.4989 METQQQQQQQEEGGGNRGGYMCRQSSTRWTPTSDQIRILKDLYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTTTTTSSSDLHPPSTPMHFHNRPPPPPTPTTNNIPPPPNNWKPDHEPNILHPKHSNIPPTHGVSSASGMVAMGQMGNYGYGSVTMEKCFRDCSISAGGSSGTISHQNLGWVGMDPYANYSNLLDKIRPGDQETLKDEHDGEDDGAPEIETLPLFPMHGEDIHGYCNLRSDSSSYYAGGWYHHAAADEYAFKNVVNGSHHRTSLELTLNSYTRRSPDST 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2377 309 MobiDBLite consensus disorder prediction 85 154 - -
Acco11g2377 309 SMART HOX_1 24 92 IPR001356 GO:0003677
Acco11g2377 309 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 300 IPR044555 GO:0003700|GO:0099402
Acco11g2377 309 Gene3D - 26 92 - -
Acco11g2377 309 CDD homeodomain 27 89 IPR001356 GO:0003677
Acco11g2377 309 MobiDBLite consensus disorder prediction 108 134 - -
Acco11g2377 309 Pfam Homeodomain 26 87 IPR001356 GO:0003677
Acco11g2377 309 SUPERFAMILY Homeodomain-like 19 92 IPR009057 -
Acco11g2377 309 ProSiteProfiles 'Homeobox' domain profile. 22 88 IPR001356 GO:0003677
Acco11g2377 309 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2377 Acco-ChrAcco11 37092778 37094263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2377 20 251 Wox Gene Family AT2G17950 44.400 1.53e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco11g2377 Homeodomain 1.7e-17 CL0123