Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2370 ATGCCAAAACCAGTGTCAGCATCGCTAATTTCACACTCACCTACGCCAAGTGACAGTGCCCATTCAACACCGCCACTCGCCTGCTTTCGAGTTCATCTCAGGAGAGGCGCCATGGGACGGGTCATCCGTGCACAGAGGAAGGGTGCTGGTTCCGTATTCAAATCACACACACACCACCGCAAGGGTCCTGCGAGATTCAGAAGCCTCGACTTCGGCGAGCGAAATGGGTATCTGAAAGGTGTGGTCACCGATGTTATTCACGACCCTGGTCGCGGAGCTCCTCTTGCCAAGGTTAGTTTTAGGCATCCGTTTAGATATAAGAAGCAGACCGAGCTTTTTATTGCGGCGGAGGGTTTGTACACTGGCCAGTTCATCTACTGCGGTAAGAAAGCTTCCCTTGTCGTTGGTAACGTGTTGCCCGTCAGATCCATTCCCGAAGGAGCTGTTATTTGCAACGTCGAGCACCACGTTGGTGACCGTGGTGTGTTTGCCAGGTGTTCTGGTGATTACGCCATTGTTATCAGCCACAACCCAGATAACGACACTTCGAGGATCAAGCTTCCATCTGGAGCAAAGAAGATTGTTCCAAGTGGCTGCCGTGCCATGATTGGCCAGGTCGCAGGTGGAGGGAGAACTGAGAAGCCTCTTCTTAAAGCTGGTAATGCTTACCACAAGTTTAGAGTGAAGAGAAATTGCTGGCCTAAGGTACGTGGTGTGGCTATGAACCCTGTAGAACATCCTCACGGAGGAGGTAATCACCAGCACATTGGACATGCTAGTACTGTTAGGCGTGATGCTCCTCCTGGCCAGAAGGTCGGTCTCATTGCTGCCAAGAGAACTGGTCGTCTTAGAGGACAAGCTGCTGCAACTGCTGCTAAAGCTGATAAAAGTGCTTGA 897 0.5151 MPKPVSASLISHSPTPSDSAHSTPPLACFRVHLRRGAMGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVSFRHPFRYKKQTELFIAAEGLYTGQFIYCGKKASLVVGNVLPVRSIPEGAVICNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAAKRTGRLRGQAAATAAKADKSA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2370 298 SUPERFAMILY Nucleic acid-binding proteins 38 134 IPR012340 -
Acco11g2370 298 SUPERFAMILY Translation proteins SH3-like domain 136 283 IPR008991 -
Acco11g2370 298 PIRSF RPL2p_RPL2a_RPL8e_RPL2o 26 292 IPR002171 GO:0003735|GO:0005840|GO:0006412
Acco11g2370 298 FunFam 60S ribosomal protein L2 207 284 - -
Acco11g2370 298 FunFam 60S ribosomal protein L8 127 206 - -
Acco11g2370 298 SMART Ribosomal_L2_2 48 127 IPR002171 GO:0003735|GO:0005840|GO:0006412
Acco11g2370 298 Gene3D - 127 206 IPR014722 -
Acco11g2370 298 PANTHER RIBOSOMAL PROTEIN L2 38 292 IPR002171 GO:0003735|GO:0005840|GO:0006412
Acco11g2370 298 MobiDBLite consensus disorder prediction 1 24 - -
Acco11g2370 298 Pfam Ribosomal Proteins L2, C-terminal domain 135 262 IPR022669 GO:0003735|GO:0005840|GO:0006412
Acco11g2370 298 Pfam Ribosomal Proteins L2, RNA binding domain 50 127 IPR022666 GO:0003735|GO:0005840|GO:0006412
Acco11g2370 298 ProSitePatterns Ribosomal protein L2 signature. 234 245 IPR022671 GO:0003735|GO:0005840|GO:0006412
Acco11g2370 298 Gene3D Ribosomal protein L2, domain 3 207 284 IPR014726 -
Acco11g2370 298 MobiDBLite consensus disorder prediction 8 22 - -
Acco11g2370 298 Gene3D - 38 123 IPR012340 -
Acco11g2370 298 SMART Ribosomal_L2_C_2 133 268 IPR022669 GO:0003735|GO:0005840|GO:0006412
Acco11g2370 298 MobiDBLite consensus disorder prediction 247 298 - -
Acco11g2370 298 FunFam 60S ribosomal protein L2 38 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2370 Acco-ChrAcco11 37061472 37063921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2370 38 295 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 91.860 0.0 499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2370 11 37061472 37063921 Acco11g2370 11 37061472 37063921 ECH