Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2366 ATGAAGCGGGCAAGGAAATCGAACAGGGTTTCGTGGGCTCCTGGATTTAATCTGTGTCAGGTGAAAATGTTCTTATCTGAGGACTACCCTTCGAAAGTTAGCCAGCCATCTCAAGATCTGCTTCAAGCAAAGACATCATCAATTTTGCGTTCAAGCACTAAAGAATCTTATGATTTACCTCCTGGCTTTGAAGGAAATCATTTTTTGAACCATCTAAAGAATGAACTCTCCCACTTGCATCAGATTAAATGGAAAGCGCCTCCCCTGTTTGCTCTCCGTCAAAATTGGCTAGTTGCCGCTGGTGAAGAAAGTAGGGAGAAAGTTGATCAAAAACTAAGAGAAATGAAGGTGCTTGAAGCAGTATATCCTCGCCCTTCAGCTATTCCTCCAAGTCCCTCTGTTTCCTTAGATGTAGAGGAGGAAGACTATGATGATAACCTCACTCCTCTTATCCCTGTCATTCCCATTGAGGAAGAAGAGCTTATGGATATGAACCCTGAATTGCCAGCAACAATTGACATCTCTGCGGCTCCGCAGACACAAAATTTGCCCCAAACCATATCAGCAACTGATAGACGCATATGTTCACAGCCTAGTACCTCATCCTCTCTAGCTTCACCTGGCGCTTCTGGGTTGGAAGCTGATCTTGCTGCAGCTTCTGCTGTTGTTGCTGCCATTATGAATAGTAATGAGCAAGGCAGCTCAATTGACATGGATCTACTTGTTAGAATACTTAATGATCCATTAATGATTGAGAAGTTGAGATGTGTTCAAGACGGAGCTGCAGCTAGTGCTGTAAGTGCACCCGCAAATACAGTGGGTTTTCCGAGTTCTGGATTCAAGTCCGCTTCTCAATCAGTTTCATCACCTCCCCTTAGACCTGATAAGCTAACTTCGGGGGTTAATCCCTCAAGTACTATGGGTTTATTTCCTGATTCTGGCTTGATGCCAGCTACTTCTTCAGTTCAATTAAGGCATACACCAGATATGCCAGCAATCCCATCACTTTCATTTTCTAGGCCTATGTCAGGGAAACTAGCAGCCCCTTCAGCTTCATTGCCTCCACACACAACTACTGCTGATATTTATAAGCCTGTGCACAAAACCACTGACCATTTGTCAAGTGGTGGTCTTCCTTCTGTTAGTACCCAACGTCCTCAACAAGATACTGTCAAGCTGGCAGCACCCATGGCTTCCATTTCATCCAGGGAACCTAGCATGTTGCCATTACCTTCAACGGGTGTGAGTATGCCTGCAGTAGTAAACCAGGTGCGACCCCCTGCAACTACAATGGCTTACCTACCTAGCACAGGCTCAGCATTTGCTGGGAAGGAAGTTCATCCTGTTAAGGATCTTAGCTATTATAAGAACCTTATTAGGCAACATGGTGCTGATGCTAATAATACTAGGCAAGAGACGCATGACACCCAAATAGCTATCCGTCAAACTAATTTCGATGATTTGAAACCGGTTCATAACAATAAACCAGAAGTGAATTTCAAAACCCAGAAACCATGCATATACTTCAAAAGTTCAAGGGGTTGTCGAAATGGTTCCAATTGCCCTTATCAACATGACATGTCAGATCAATGGGGGTCTGTCAACATCCTAGGGCACCGCGGTCCAAAAAGAGCTAAATTAGGACCAGAAATCAGGGGTAGAACATTAATATAG 1674 0.4415 MKRARKSNRVSWAPGFNLCQVKMFLSEDYPSKVSQPSQDLLQAKTSSILRSSTKESYDLPPGFEGNHFLNHLKNELSHLHQIKWKAPPLFALRQNWLVAAGEESREKVDQKLREMKVLEAVYPRPSAIPPSPSVSLDVEEEDYDDNLTPLIPVIPIEEEELMDMNPELPATIDISAAPQTQNLPQTISATDRRICSQPSTSSSLASPGASGLEADLAAASAVVAAIMNSNEQGSSIDMDLLVRILNDPLMIEKLRCVQDGAAASAVSAPANTVGFPSSGFKSASQSVSSPPLRPDKLTSGVNPSSTMGLFPDSGLMPATSSVQLRHTPDMPAIPSLSFSRPMSGKLAAPSASLPPHTTTADIYKPVHKTTDHLSSGGLPSVSTQRPQQDTVKLAAPMASISSREPSMLPLPSTGVSMPAVVNQVRPPATTMAYLPSTGSAFAGKEVHPVKDLSYYKNLIRQHGADANNTRQETHDTQIAIRQTNFDDLKPVHNNKPEVNFKTQKPCIYFKSSRGCRNGSNCPYQHDMSDQWGSVNILGHRGPKRAKLGPEIRGRTLI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2366 557 MobiDBLite consensus disorder prediction 277 301 - -
Acco11g2366 557 ProSiteProfiles Zinc finger C3H1-type profile. 500 528 IPR000571 GO:0046872
Acco11g2366 557 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 548 - -
Acco11g2366 557 SUPERFAMILY CCCH zinc finger 502 529 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2366 Acco-ChrAcco11 37023513 37027364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2366 81 163 Homeobox Transcription Factor Family AT4G02560 40.964 6.15e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Acco11g2366 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2366 11 37023513 37027364 Acco11g2366 11 37023513 37027364 ECH