Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2330 ATGGCGGGTTTGTTCTCACTAGGCGGTGGTGGAGGAGGAGGTAGAGGAGGGGGGAGCAACCAAGAAGACGAACCCGGCAACCACCATAATAACCCACCCACCGGAGTTCCTCATCCAGACGCTGCCGCCTATTTCTGGTACAAGAATAATGAAGACGTGTCTTGTTACAGAGGCTTCGAGCTGTGGAACCAGCAACCTGTGATGCCTCCTCAAGCGAGGCCACTTCTCCCCCAAGATCTTTACTCCTTAGGGGTGGGGCCGAGCAGCAGGAGCTCCGATGATCAGTCATCGTCGAGATCGGGCGCCATGATGATGATGCGTTCCGGCGGTGGAAGCAGCGGTGGCGGAGGAATAAGCTGCCAGGACTGTGGGAACCAGGCCAAGAAGGACTGCCCACACATGCGGTGCAGGACTTGCTGTAAGAGCCGTGGCTACGACTGCCAGACCCACGTGAAGAGCACTTGGGTTCCCGCCTCCAAGCGACGGGAACGACAGCAGCAGCAGCAGCAACCACTTCAGCTTCGAGGGGGAGCAGCAGACAACAATCCCAAGAGGCTGAGAGATACCACTTGTAATAATAACCCCAGCACTTCCACTACTCATGTGCAAATGGCTACTACACACTCTTCATCAGCAGAAGGGTTAGAGCATGGGAGTTTTCCGGCGGTGGTTAGTTCCTCGGCCGAGTTCCGGTGCGTACGGGTTAGCTCCATGGACGAGGCTGATGAGCAATACGCATACCAAACGGCGGTGAACATCGGAGGCCATGTTTTCAGAGGAATTCTCTATGACCAAGGCCCTGATCCCAATTACATGTCCACCGCTGATACCTCTCCCGGTGGAGCCGTTCAGCCCCTCAACCTCATTGCCGCCACCGGTGCTTCTGCTCTTCCAGCTGCTGTCGCAGCAAGCGGTGGTGGTGCCGTAGCCGGGGCTTCTTCCTCCACCGGGCCGCTCCTCGATCCTTCCTTGTATGCGGCGCCACTTAACCCTTTCATGTCTGGCAGTGGTACGCAGTTCTTTCCTCACCCAAGATCTTGA 1041 0.5696 MAGLFSLGGGGGGGRGGGSNQEDEPGNHHNNPPTGVPHPDAAAYFWYKNNEDVSCYRGFELWNQQPVMPPQARPLLPQDLYSLGVGPSSRSSDDQSSSRSGAMMMMRSGGGSSGGGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERQQQQQQPLQLRGGAADNNPKRLRDTTCNNNPSTSTTHVQMATTHSSSAEGLEHGSFPAVVSSSAEFRCVRVSSMDEADEQYAYQTAVNIGGHVFRGILYDQGPDPNYMSTADTSPGGAVQPLNLIAATGASALPAAVAASGGGAVAGASSSTGPLLDPSLYAAPLNPFMSGSGTQFFPHPRS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2330 346 MobiDBLite consensus disorder prediction 1 37 - -
Acco11g2330 346 MobiDBLite consensus disorder prediction 157 216 - -
Acco11g2330 346 MobiDBLite consensus disorder prediction 78 117 - -
Acco11g2330 346 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 16 330 IPR007818 GO:0003700|GO:0006355
Acco11g2330 346 MobiDBLite consensus disorder prediction 185 214 - -
Acco11g2330 346 NCBIfam LRP1 C-terminal domain 220 267 IPR006511 -
Acco11g2330 346 MobiDBLite consensus disorder prediction 157 176 - -
Acco11g2330 346 NCBIfam putative zinc finger domain, LRP1 type 119 161 IPR006510 -
Acco11g2330 346 Pfam Domain of unknown function (DUF702) 117 268 - -
Acco11g2330 346 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2330 Acco-ChrAcco11 36745453 36747090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2330 1 335 C2H2 Transcription Factor Family AT5G66350 49.162 9.58e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Acco11g2330 DUF702 1.1e-63 No_clan