Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2320 ATGTTTTCTGCCAGAGAGATGCCTTCTCCATCCTCAATTTTCTCAGCTTATGCCTCCATGGCTACTTCTGTCATGCTGTTTCGTTCCATGGCCAACGACCTCATACCTGGTCCTGTCCGAAGTTATCTCCACAATACTTTTCGCTACCTCATCAAAACTTCCTCCCCTGTTCTCACTCTCGTCATCGAAGAATTCTGCGGAATTTCTCTCAACCAAGTGTTTGAGGCTGCAGAAGTTTACTTATCTTCTAGAGTCAGTCCCCTAAACAGGAGGCTCAAGATCAGCAAGACTCCCAAAGACAAGTCTTTGAAGATTCGGCTGGAAAAGAATGAGCAGCTGGTAGATTCATTTAATGGGATTGAGCTCAAATGGGTACTCACCTATGCAGAGTCAGGGAACAATAATAATCAGTTTGATACAAACATTAAGCGATACTTCGAGTTGAGTTTTAACAAGAAGCATAGGGTGACGATTGTAGATCATTATCTTCCCTTCGTCCTCCAGCAAGCCAAATCCATTAAAGACGAGGAAAAGATGTTGAAGATGTATACCTTAAGCAGCAACTCCTATGGTCATCCGGGGGTCAAGTGGGATTCTATCAATCTCGAACATCCATCCACCTTTGAGACTCTGGCTATGGACCCAAAGGTGAAGAATGCTGTGATGGAGGATTTGAATAGGTTCGTGAGGAGGAAGAACTTTTACAAGAAAGTCGGCAGGGCTTGGAAACGAGGGTACTTGCTGTATGGGCCTCCGGGTACTGGGAAATCTAGCTTGGTTGCAGCCATAGCCAATTACTTGAAGTTTGATATCTATGACCTTCAGCTTGAAAGTATTACGAGAGATTCGGAACTCAGAAAGCTTCTTCTGAGCACTGCTAATAGGTCCATTCTAGTCATCGAAGACATTGATTGCAGCGTTGATCTGGCGGACCGCCGCCATCATGTAGAAGGACGGAAGCACGCCGAGCCTCCGTATAAGCTGACGTTGTCTGGGTTACTGAACTTCATAGATGGCCTTTGGTCGAGCTGTGGAGATGAGAGGATTATAATATTCACCACCAACCACAAAGAAAGACTAGACCCTGCTCTGTTACGCCCAGGAAGAATGGATATGCACATCCACATGTCCTATTGCTCTTACGACGGCTTCAAGCTTTTGGCCTCAAATTACTTGGGAACTTCCAGTGAGCAACACCCGGATCTGTTTACAGAAATAGAAGGTCTCATAGAAGACACAAACGTAACCCCTGCTCAAGTGGCAGAGGAGCTAATGAAGAGTGAAGATGCTAAAGACGCTCTTGAAGGCTTTGTCGGGCAGCTCAAGCGCAAGAAGATGGAAGGCGATGTGTGTGAGAATGATGAAACAGAGAAAGCTTTGATTCCAGAAGCCAAAAGGGCAAGAGTTAATAATGGCAAACAGGGCAAAACTAAGAGGAAGAATAGTTTGCGTACCCCACCAAGAAGGACAAGAGGAGGAAAAAGCTTGTAA 1491 0.4534 MFSAREMPSPSSIFSAYASMATSVMLFRSMANDLIPGPVRSYLHNTFRYLIKTSSPVLTLVIEEFCGISLNQVFEAAEVYLSSRVSPLNRRLKISKTPKDKSLKIRLEKNEQLVDSFNGIELKWVLTYAESGNNNNQFDTNIKRYFELSFNKKHRVTIVDHYLPFVLQQAKSIKDEEKMLKMYTLSSNSYGHPGVKWDSINLEHPSTFETLAMDPKVKNAVMEDLNRFVRRKNFYKKVGRAWKRGYLLYGPPGTGKSSLVAAIANYLKFDIYDLQLESITRDSELRKLLLSTANRSILVIEDIDCSVDLADRRHHVEGRKHAEPPYKLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYDGFKLLASNYLGTSSEQHPDLFTEIEGLIEDTNVTPAQVAEELMKSEDAKDALEGFVGQLKRKKMEGDVCENDETEKALIPEAKRARVNNGKQGKTKRKNSLRTPPRRTRGGKSL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2320 496 MobiDBLite consensus disorder prediction 471 487 - -
Acco11g2320 496 Pfam ATPase family associated with various cellular activities (AAA) 247 377 IPR003959 GO:0005524|GO:0016887
Acco11g2320 496 SMART AAA_5 242 380 IPR003593 GO:0016887
Acco11g2320 496 PANTHER BCS1 AAA-TYPE ATPASE 15 446 - -
Acco11g2320 496 Gene3D - 375 447 - -
Acco11g2320 496 Gene3D - 196 374 IPR027417 -
Acco11g2320 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 428 IPR027417 -
Acco11g2320 496 MobiDBLite consensus disorder prediction 445 464 - -
Acco11g2320 496 MobiDBLite consensus disorder prediction 445 496 - -
Acco11g2320 496 ProSitePatterns AAA-protein family signature. 348 366 IPR003960 GO:0005524|GO:0016887
Acco11g2320 496 CDD RecA-like_BCS1 221 376 - -
Acco11g2320 496 FunFam AAA-ATPase ASD, mitochondrial 198 374 - -
Acco11g2320 496 Pfam Domain associated at C-terminal with AAA 35 126 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2320 Acco-ChrAcco11 36673237 36675722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2320 220 376 Calmodulin-binding Proteins AT3G56690 29.091 1.46e-10 62.0