Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2297 ATGGACACTGATACCGGTGAAGTAGCACGCACGCTACCAAATCCTTGCTCGTTCAAGGTGCATCATACAATGTGCATGGAACTCATGAGATTAGTTTATAGAATCTCAAAGATATTACCACATATAGAGGCAACACGGCCTCGATGCTTATCGGGAATTCCGTCTCTGTGCTCTCTAAACACTGCCATCGATAAGGCCAAACTCCTTCTGCAACATTGTTATGATTGTAGCAAACTATACCTGGCTTTGACGGGACATGCGGTCCTCTTAAGATGCTTAAAGGCAAGAAATTCATTAGCAAAAAGCTTGGACCAAATTCAGAGTATGGTTCCAGTTATGTTGGCGGCAGAGATTTCTCAAATAATTGATGATCTGGGATGTGCTACATTCGTTCTGGACTCATCCGAAGAAGAGGCTGGGAGGGTTGTGAGAGAACTGCTCCAGAAAAGTCCTTCAGCATCGGATTCAAGGGAAGATTCTGAGATTAAAGCTCTTCAGATTGCAGCAGCAAGACTTGATATTACATCCTCAAAGGCCATCTTAATAGAGAAAAGATCCATTAAGAAGTTGGTAGATAAACTTGGGCCAAATGAACCCACGAAAAAGATGATATTGAAGTATCTTTGGCATCTATTGAAAAAGCATGGAAACCATATCATGGGAGGTCAAATTGGAATGGTCCATGCTCAAAGTGATCAACCAATTGCAACTGATAAATCAAGTCGCAGTCCTCCTCACAGTCATTGTGCTGGTCAATGTAGAATTCAGTCCATTCACACCCATGAATTGAGCAGAGTTATCTCTCCTAAGGAATACGGGTGCCCAATTTCTTCAGCATTGATGTATGATCCTGTTGTTATTGCTTCTGGGGAAACATATGAAAGGATGTGGATACAAAAGTGGTTTGATGAAGGTCATGATATATGCCCAAAAACTGGGCAGAAACTGGCTAATACGTCAGTGACACCAAATACAGCAATGAAGGAGTTAATATCAAAATGGTGCAGAGAGAATGGAGTCATCATTACTGACCCCAGCAGCAGAGCAGCAAAGTTCAGTTCACGAGAATCTTCCTTCGTTTCCATTGCGAGCTTTAACGTTACATTGAATAAATTACACTTTCCAGTGGATCTTAGCATCGTGTCCATTGAATCAACAGATAGTTATGATTCAGATTCCTCGCAGACTTTAACGACTCATCACTTGATGCTCATGAGGACTAATGATAATTCTTACAGTAGTCATGAATCTCATGCACTCAAAGATGGTGCAGATTCAATGCTTTTGTCTCAATTCCCTGGTCTTCAATGGGATTCTCAATGCAAAGTCATCGAAGATCTGAAAGTTTCTTTGAAAAGCAACTGCCAACCTTTTTGTTCTTCATCAGCTGAGGGTTTCATTGAATCACTCATCAAATTTTTGAACAATGCATATGACCTGCAAGACATAAAAGCTCTGAGAGCGGGAATGCAGCTGTTCTTGGAATTTGTAAACAAGCACAGAAACAGCCAAACGTATCTAAGAGAGGATTCATTCAGTATGTTGGGCACTCTTCTTGATTCAGAAGTTAAAGGAGAAGCTCTTGCCGTGATGGAAAAACTATCCGAGTGTGAGCATAGTAGAGCTAAAATTGCAGCATCCAGTGCACTTGTTTCCATTTTAAAGATTCTCGACTCCGAGAGCAGAGAGATCCAACAACAATCTATTCGAATAATGCAAAATTTGTCCTTCAACAGTGAAGCTTGTCACCACATGGTATATCTCCCGTTCATCATCCCAGGATTACTGCCATTTTTGAAAGATGGGACTTCGTTAAGATACTGCATATGCATATTGAAAAACCTTTGTGATACAGAGGAGGGTAGGGTTTCTGTTGCCAAAACCGAAGGATGCATATCTGCTATTGTTGAAATACTTGAGACTGACAGTGACGAGGAACAAGAACATGCACTGGCTGTGCTACTTTCTTTATGCTCTCTACGTTCTGATTATTGTAGGCTCGTCATGGAACAAGGGGAATGGGTTATTTCTTCCCTTTTCTTTATTGCCAATAATGGAAAAGACAGAGGAAAGGCGAGTGCATTGAAGTTGCTCGGACTTTTGACGGATAATGTAAGGGTTGAAAATGAAGAAAGGTCTAAACCAACTCCCAGCACTTCTCAAGAACCTAACAATCGCCCTCAACAAAAGAAATCATCAAAAATATCTGCATCTTTCAAGAAGTTTTTAGTTTCTTGCATTACAGGTAAGAGATGA 2256 0.4082 MDTDTGEVARTLPNPCSFKVHHTMCMELMRLVYRISKILPHIEATRPRCLSGIPSLCSLNTAIDKAKLLLQHCYDCSKLYLALTGHAVLLRCLKARNSLAKSLDQIQSMVPVMLAAEISQIIDDLGCATFVLDSSEEEAGRVVRELLQKSPSASDSREDSEIKALQIAAARLDITSSKAILIEKRSIKKLVDKLGPNEPTKKMILKYLWHLLKKHGNHIMGGQIGMVHAQSDQPIATDKSSRSPPHSHCAGQCRIQSIHTHELSRVISPKEYGCPISSALMYDPVVIASGETYERMWIQKWFDEGHDICPKTGQKLANTSVTPNTAMKELISKWCRENGVIITDPSSRAAKFSSRESSFVSIASFNVTLNKLHFPVDLSIVSIESTDSYDSDSSQTLTTHHLMLMRTNDNSYSSHESHALKDGADSMLLSQFPGLQWDSQCKVIEDLKVSLKSNCQPFCSSSAEGFIESLIKFLNNAYDLQDIKALRAGMQLFLEFVNKHRNSQTYLREDSFSMLGTLLDSEVKGEALAVMEKLSECEHSRAKIAASSALVSILKILDSESREIQQQSIRIMQNLSFNSEACHHMVYLPFIIPGLLPFLKDGTSLRYCICILKNLCDTEEGRVSVAKTEGCISAIVEILETDSDEEQEHALAVLLSLCSLRSDYCRLVMEQGEWVISSLFFIANNGKDRGKASALKLLGLLTDNVRVENEERSKPTPSTSQEPNNRPQQKKSSKISASFKKFLVSCITGKR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2297 751 MobiDBLite consensus disorder prediction 708 736 - -
Acco11g2297 751 Gene3D - 439 725 IPR011989 -
Acco11g2297 751 Pfam U-box domain 269 338 IPR003613 GO:0004842|GO:0016567
Acco11g2297 751 SUPERFAMILY ARM repeat 438 704 IPR016024 -
Acco11g2297 751 PANTHER U BOX DOMAIN-CONTAINING 25 709 - -
Acco11g2297 751 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 343 IPR013083 -
Acco11g2297 751 SUPERFAMILY RING/U-box 268 344 - -
Acco11g2297 751 ProSiteProfiles U-box domain profile. 267 341 IPR003613 GO:0004842|GO:0016567
Acco11g2297 751 MobiDBLite consensus disorder prediction 716 736 - -
Acco11g2297 751 CDD RING-Ubox_PUB 269 321 IPR045210 -
Acco11g2297 751 SMART Ubox_2 271 334 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2297 Acco-ChrAcco11 36528615 36531643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2297 4 730 U-box Gene Family AT1G67530 31.491 1.47e-107 344
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2297 11 36528615 36531643 Acco12g2096 12 32514796 32516510 CCT
Acco11g2297 11 36528615 36531643 Acco11g2297 11 36528615 36531643 ECH
Acco12g2096 12 32514796 32516510 Acco11g2297 11 36528615 36531643 ECH