Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2296 ATGATGAAGCAGGCAAATAAAACCCTTTTTGAGGATCTTAAAAGTTTCTTCAGTGTTCCATTAGAACAAGCTGTTCCCGTTTTCCAAATCCTCCTGCAGGAAGCTACCGTGTACGTTGACATGGAAGCACCATCTTGGACTCCAAGGCAGAACAAACTGTTTGAACAAGCCCTGGCTTTATATGACAGGGAAACCCCTGACAGGTGGGAAAATGTTGCCAGGGTGGTGGGAAAATCTGTAGAGGAGGTCAAAAGGCACTTTGAGGTTCTCAAGGAAGATATTGAGCGCATTGAGCTTGGTCAAGTCCCATTTCCTCATTACAAAACCCACCGCAACAATTCCTAA 345 0.4493 MMKQANKTLFEDLKSFFSVPLEQAVPVFQILLQEATVYVDMEAPSWTPRQNKLFEQALALYDRETPDRWENVARVVGKSVEEVKRHFEVLKEDIERIELGQVPFPHYKTHRNNS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2296 114 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 43 112 IPR044636 GO:0003700
Acco11g2296 114 Gene3D - 41 104 - -
Acco11g2296 114 CDD SANT 45 91 IPR001005 -
Acco11g2296 114 SUPERFAMILY Homeodomain-like 45 95 IPR009057 -
Acco11g2296 114 SMART sant 42 93 IPR001005 -
Acco11g2296 114 ProSiteProfiles SANT domain profile. 41 95 IPR017884 -
Acco11g2296 114 FunFam Transcription factor SRM1 39 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2296 Acco-ChrAcco11 36508499 36509357 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g2092 12 32492335 32493057 Acco11g2296 11 36508499 36509357 ECH
Acco11g2296 11 36508499 36509357 Acco11g2296 11 36508499 36509357 ECH
Acco01g2027 01 36128508 36129073 Acco11g2296 11 36508499 36509357 ECH
Acco11g2296 11 36508499 36509357 Acco12g2092 12 32492335 32493057 ECH