Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2278 ATGCAGTCTGATTCACACCTCAACCCATGGCTTCTAACTCTCATTCTCGGGCTACCCCTCATCCTTCTTCTGTTCATCAAAAGAAAGCCCAGACTTAATCTTCCCCCAGGCCAGATGGGATGGACTCTTGTTGGAGAAACACTTTGGTTTACGAGGTCATTCCCAGGTGCCACACAAGGAGACTTCATGGAACAGCATATAGCAAGGTATGGTAAAATCTTCAAGACGTCATTGTTTGGGAAGCCAACGATTGTTTCAGCAGATGCAGAGCTGAACAAGTTCATACTCAACAACGAAGGGAAATTATTCGAAAGTAGCTACCCAAAAGGCATTCGTGAATTACTAGGGAAATGGTCTATGTTGGTGGTGGTGGGTGACACGCACAGAGACATGAGATCTATAGCACTCAACTTTATGGGCAGTGCCATTCTCAAAACAGCCCTGTTGAAAGACGTGGAGAAGCATGCCCTGCTTGTTCTGAACTCGTGGAAGGAGAATTTCAAATTTTCTGCTCATCAAGAAGCAAAGAAGTTCACTCTCAACTTGCTGGTGAAGAATATATTGAGCCTGGAACCTGATCATCCTGAGGCAGAGGTGTTGAAGAAAGCGTACGCGACTTACATGAAGGGGTTCTTGTCGGCGCCTTTGAACTGTCCTGGAACCGCATACCGGAAGGCATTACAGTCTAGGTTCACCATATTGAAGTTACTAGAGAAGAAAATGGAGGAAAGAAACCAAAACATAAAAGAGGGTGATGAAGGCTGGGATGATGACCTTCTAGGCTGGGTTTTAAGGAATTCAAATATGACTTCAGAACAAATTCGTGACCTGATTCTTCTCTTGCTTTTTGCTGGCCATGAAACTTCATCCCGAGCCATATCTCTTGCACTTCACTTTTTACCAGGTTGTCCTCAAGCGATCCAGCAGTTAAGGGAAGAACACAGAGAAGTTGCCAGAGCCAAAAGGGAAGCAGGTGAGGTGGACTTGACTTGGGATGACTACAGACGGATGGAGTTTACTCACTGTATCGTCAATGAAACACTTCGGCTGGGAAGCGTTGTGAAGTATGTTTGCAGGAAAGCTATCAAGGATGATATTAAGTATAAAGGTTATGACATTCCGCGTGGCTGGCAAGTCCTTCCAATGTTTATAGCCGTGCATATGGATCCTTCCCATTTTGACCAACCTCTACTCTTTCATCCCTGGAGATGGCAGGATAATGGGAGTAATAAGCTGATGGCGTTTGGGGGAGGGGGAAGACTGTGCCCTGGATCAGAGTTAGCCAAACTAGAAATAGCGATATTCATTCACCATCTCATCCTCAACTTTCATTGGGACTTGGCTGAAGATGATCAACCTCTTGTCAACCCTTTCATTGATTTTCCTAAAGGCTTACCCATTACTGTCCAACGTCTATCTTCTATTTGA 1428 0.4489 MQSDSHLNPWLLTLILGLPLILLLFIKRKPRLNLPPGQMGWTLVGETLWFTRSFPGATQGDFMEQHIARYGKIFKTSLFGKPTIVSADAELNKFILNNEGKLFESSYPKGIRELLGKWSMLVVVGDTHRDMRSIALNFMGSAILKTALLKDVEKHALLVLNSWKENFKFSAHQEAKKFTLNLLVKNILSLEPDHPEAEVLKKAYATYMKGFLSAPLNCPGTAYRKALQSRFTILKLLEKKMEERNQNIKEGDEGWDDDLLGWVLRNSNMTSEQIRDLILLLLFAGHETSSRAISLALHFLPGCPQAIQQLREEHREVARAKREAGEVDLTWDDYRRMEFTHCIVNETLRLGSVVKYVCRKAIKDDIKYKGYDIPRGWQVLPMFIAVHMDPSHFDQPLLFHPWRWQDNGSNKLMAFGGGGRLCPGSELAKLEIAIFIHHLILNFHWDLAEDDQPLVNPFIDFPKGLPITVQRLSSI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2278 475 CDD CYP90-like 66 471 - -
Acco11g2278 475 PANTHER CYTOCHROME P450 26 30 457 - -
Acco11g2278 475 Gene3D Cytochrome P450 26 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Acco11g2278 475 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 SUPERFAMILY Cytochrome P450 27 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco11g2278 475 Coils Coil 303 327 - -
Acco11g2278 475 Pfam Cytochrome P450 35 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2278 Acco-ChrAcco11 36364867 36368904 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2278 28 405 Cytochrome P450 AT3G50660 60.250 6.67e-180 509