Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2276 ATGGGTGTGGACTATTACAAGATCTTGCAGGTCGACAAGAATGCCAAAGACGACGACTTGAAGAAGGCTTACAGGAAGCTTGCCATGAAATGGCATCCTGATAAGAACCCCAATAACAATAAAGAAGCTGAAGCTAAATTCAAGCAAATTTCTGAAGCCTATGATGTTCTGAGTGATCCACAAAAGAGAGCCGTCTATGATCAGTTTGGTGAAGAGGGTCTGAAGGGTGGGGTTCCGCCTTCCGATGCCGGAGGGGCTTCTTTCTTTCTAACGGGAGAAGGAACGACATCGTTTAGGTTCAATCCTAGACACGCCGACGACATTTTTGCAGATTTATTTGGAGGGATGAGGTCGAGGTTCTCTAGTGGGATTTTTGGCGATGATATGTTCGGATCATTTGGAGATGCAAGAGGGGGAGTCCATATGAGTCCAGGTGGTCCTCGAAAAGCTCCTCCTATTGAGAACAGATTGCCCTGTAGTCTCGAAAAATTGTACCAGGGAACTACAAAGAAGATGAAGATCTCCAGAGAAATCGCTGATGCTAGTGGGTAA 552 0.4583 MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNNKEAEAKFKQISEAYDVLSDPQKRAVYDQFGEEGLKGGVPPSDAGGASFFLTGEGTTSFRFNPRHADDIFADLFGGMRSRFSSGIFGDDMFGSFGDARGGVHMSPGGPRKAPPIENRLPCSLEKLYQGTTKKMKISREIADASG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2276 183 SMART dnaj_3 3 62 IPR001623 -
Acco11g2276 183 PRINTS DnaJ domain signature 42 62 IPR001623 -
Acco11g2276 183 PRINTS DnaJ domain signature 6 24 IPR001623 -
Acco11g2276 183 PRINTS DnaJ domain signature 24 39 IPR001623 -
Acco11g2276 183 PRINTS DnaJ domain signature 62 81 IPR001623 -
Acco11g2276 183 Pfam DnaJ domain 4 67 IPR001623 -
Acco11g2276 183 CDD DnaJ 4 59 IPR001623 -
Acco11g2276 183 Gene3D DnaJ domain 3 123 IPR036869 -
Acco11g2276 183 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Acco11g2276 183 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 182 - -
Acco11g2276 183 SUPERFAMILY Chaperone J-domain 3 100 IPR036869 -
Acco11g2276 183 Gene3D - 142 182 - -
Acco11g2276 183 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Acco11g2276 183 FunFam DnaJ subfamily B member 13 3 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2276 Acco-ChrAcco11 36341619 36342287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2276 5 67 C2H2 Transcription Factor Family AT1G74250 40.299 1.04e-10 57.8