Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2253 ATGGCTAAACGTTTCAAGTTTCGAATCTGCCGGGTTTTTCAGTCTTGCCGATCCAAAGATCCTTCCACACTTCCCTCCAACCCTGTCCCTTGCTACCTCCCTGAACCCCACCGCTCCTCCCTCCGCCGCCACGTGTCACATGCCTTTGAATCTGTCGGCTGTGGCTTCAGCTCATCAAGACCCACCCTCTCCGACGCCGAGGACCACCACAACAAACCCCACCACGACTTCCACTGGGAACAACAAGACAAATGGCACGTCGTCGCCAAGGTCTGCACCGCCCCCGACAACAACACCACACCTCGCCGCAAAATCTACAGCTCCTCTGTCTCCGCCGCCTCTGACGACGACGACAATGACGACGTCTTGCCTCTCCCTCCACCTCCTCGTGCAACGAAGAAGAAAGGACGGGCTAAGAAGAAGAAGACGACGCTGAGGTTTCGTATGAGCACCTCCTCCGCTGACAGCTGTGGATTATTTAGCAGCGATGGCCATGACATCATTGACGAAGAAGAAACCGAAACCCTAGTTTCATCTTCTAGAAGCTTCTCGACGGACTCTTCTTCCGTCGAGTTGGACTCTCGCTTGGAGAGCATTTGCGAGACGGCAGGTCAGCACCAGGGAGTTAAGAAGATGAAGTCAAAATCAAAGAAGAAGAAGAAGAAAATTAAGAAGAAAAAGAAAGATGGAAGAGTGAGCTTTTCGTCGTCGCCGGCGAGGGTGTCGATGTTATTGAGGCTGGTGCCATGCAGCGTGGAGGGGAAGGTGAGGGAGAGCTTCGCAGTGGTGAAGAGGTCGGAAGATCCGTACGAGGATTTCAGAAAGTCGATGATGGAGATGATTATGGAGAAGCAGATTTTTGAGGACACGGATTTGGAGCAGCTCTTACATTGCTTCTTGTCTCTTAATTCCAGTGAACATCATGAGGTTATTGTGCAGGTCTTCGCTGAGATTTGGCAGTCTTTGTTCACTTCTGCCTCAACAACACGTAGATCGAGATCTATGAAATGCTCCCACGACGTTCTTAAGTAG 1032 0.5136 MAKRFKFRICRVFQSCRSKDPSTLPSNPVPCYLPEPHRSSLRRHVSHAFESVGCGFSSSRPTLSDAEDHHNKPHHDFHWEQQDKWHVVAKVCTAPDNNTTPRRKIYSSSVSAASDDDDNDDVLPLPPPPRATKKKGRAKKKKTTLRFRMSTSSADSCGLFSSDGHDIIDEEETETLVSSSRSFSTDSSSVELDSRLESICETAGQHQGVKKMKSKSKKKKKKIKKKKKDGRVSFSSSPARVSMLLRLVPCSVEGKVRESFAVVKRSEDPYEDFRKSMMEMIMEKQIFEDTDLEQLLHCFLSLNSSEHHEVIVQVFAEIWQSLFTSASTTRRSRSMKCSHDVLK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2253 343 Pfam Transcriptional repressor, ovate 266 323 IPR006458 -
Acco11g2253 343 NCBIfam uncharacterized plant-specific domain TIGR01568 260 323 IPR006458 -
Acco11g2253 343 MobiDBLite consensus disorder prediction 210 229 - -
Acco11g2253 343 MobiDBLite consensus disorder prediction 96 113 - -
Acco11g2253 343 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 98 325 IPR038933 GO:0045892
Acco11g2253 343 MobiDBLite consensus disorder prediction 203 235 - -
Acco11g2253 343 ProSiteProfiles OVATE domain profile. 262 321 IPR006458 -
Acco11g2253 343 Coils Coil 209 229 - -
Acco11g2253 343 MobiDBLite consensus disorder prediction 96 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2253 Acco-ChrAcco11 36188589 36189620 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Acco11g2253 Ovate 8.3e-26 No_clan