Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2243 ATGAGAGTTCCTGCTTCGTCGTCCTCACAAACCTATCACCTTTCCTCCGATCCAAAACCCACTGTCCGAAACCTTTCCAACGTCAATACGGCGGGCACCTGCTACGAACCCACCTCTGTTCTAGACCTGTGCCGGAGTCCCAGCCCTGGCTCCGCCACCTTCGTCCCTAAAAATCCCACCACTCAAGCCACCATCACCCAGTCACCAAAACCTGAAGACTCCCTGGGGTGGGACGACCATGTGTTGCATAGTCTGGCAGATTGGGATTCCGTCATGAAGGATTGGGGTTTACAGGATGACACTCTTTCTCACGTTTTGAAGAGTACTGTTCCACGATCAAACCCATGTGAGCCTCAGGTCCCGCACCTTCCTGAGTTCCCCAATTCTCAGGAGGTTCCTTTCGAACAAGCCCCAGATTTGAGTCTCTCGGATATTTATATGAGTCAAAATATGGGTGGCAACTACAATAACCCCTTTGATCATTTGGTTCATCAGTTCAATCACAACCATAATTGGCAAAGCAACGGGTTTGATTTGATGATCGAGGATCTTATAAGAGCAGCCGATTGCTTCGACACGAATCAGCCACAGCTCGCCCAGGTGATATTGGAGCGGCTCAATCAACGTCTACGATCCCCCGTCGGAAAACCACTCCACAGAGCTGCGTTTTATTTCAAAGAGGCTCTACACTCTCTTCTCTCCGGTTCGAACCGAACCGGCCCGCGTCTTTCTTCCTTGGTGGATATCGTTCAGAGCATCAGAACCTTCAAAGCTTTCTCAGGAATTTCTCCAATTCCCATGTTCTCCATCTTCACCACCAACCAAGCACTCCTCGAAGCCCTTCACGGATCATCCCTCATCCACATCATCGACTTCGAATTCGGTTTAGGCATTCAGTACGCTTCTCTGATGAAAGAGATTGCAGAGAAGGCCGAATCCTGTAAAATCAACTCGCCGGTCCTTCGAATCACGGCGGTCGTGCCAGAAGAGTACGCCGTGGAGAGCAAATTGATCCGGGAGAACCTAAACCAGTTCGCTAACGATCTCAAGATCCGAGTCCAAACCGAGTTCGTGCCGTTCCGAACCTTCGAAACGTCGTTAATGAAGGCTGTTAAGTTCATGGATGGAGAGAAAGCCGCCGTTCTGCTATCCCCGACCATCTTCCGCCGTCTCGGATCAACAAAAAACATCACGGCGTTTCTTGGCGATATTCGGAGGGTTTCTCCAAGCGTGGTTGTATTCGTAGACGGTGAAGGATGGGCAGACGACATTGCAGCGACGTCGTTTCGTCGGAAGGTTGTGGACAGCCTGGAATTCTACTCGATGATGTTGGAGTCGTTGGATGCGACACTTGTTGGAGGAGGTGGAGAATGGATAAGAAAAATAGAGATGCTTCTGTTGCGGCCGAAGATATTGGCAGCGGTGGAAGGCGGAGGATGGCGGGTTCCGGCGTGGAGGGAGCTGTTTTACGGGGCGGGAATGAGGGCTGTGCAGTCAAGCAGGTTCGCGGATTTTCAAGCAGAGTGTTTGTTGGCCAAAGTACAGATCAAAGGCTTCCACGTGGCAAAACGACAGGCAGAATTGGTGCTGTTCTGGAATGAGCGGGCTATGGTTTCCACGTCAGCTTGGCGATGTTAG 1638 0.511 MRVPASSSSQTYHLSSDPKPTVRNLSNVNTAGTCYEPTSVLDLCRSPSPGSATFVPKNPTTQATITQSPKPEDSLGWDDHVLHSLADWDSVMKDWGLQDDTLSHVLKSTVPRSNPCEPQVPHLPEFPNSQEVPFEQAPDLSLSDIYMSQNMGGNYNNPFDHLVHQFNHNHNWQSNGFDLMIEDLIRAADCFDTNQPQLAQVILERLNQRLRSPVGKPLHRAAFYFKEALHSLLSGSNRTGPRLSSLVDIVQSIRTFKAFSGISPIPMFSIFTTNQALLEALHGSSLIHIIDFEFGLGIQYASLMKEIAEKAESCKINSPVLRITAVVPEEYAVESKLIRENLNQFANDLKIRVQTEFVPFRTFETSLMKAVKFMDGEKAAVLLSPTIFRRLGSTKNITAFLGDIRRVSPSVVVFVDGEGWADDIAATSFRRKVVDSLEFYSMMLESLDATLVGGGGEWIRKIEMLLLRPKILAAVEGGGWRVPAWRELFYGAGMRAVQSSRFADFQAECLLAKVQIKGFHVAKRQAELVLFWNERAMVSTSAWRC 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2243 545 ProSiteProfiles GRAS family profile. 171 544 IPR005202 -
Acco11g2243 545 MobiDBLite consensus disorder prediction 50 74 - -
Acco11g2243 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 150 539 IPR005202 -
Acco11g2243 545 MobiDBLite consensus disorder prediction 51 71 - -
Acco11g2243 545 MobiDBLite consensus disorder prediction 1 24 - -
Acco11g2243 545 Pfam GRAS domain family 181 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2243 Acco-ChrAcco11 36108588 36110225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2243 75 544 GRAS Transcription Factor Family AT4G36710 52.165 3.25e-154 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco11g2243 GRAS 3e-81 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2243 11 36108588 36110225 Acco11g2243 11 36108588 36110225 ECH