Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2219 ATGCGTCTCTTTCTCCTCATCTCAATCCTCTGTTTCGCTCTGTTCTGTAGTTTCCCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTGGGCACAAACGCTTGTCCTAGAAAGGGCAATTCAAAATCTATTCGTGGTTACACTTGTAATGGCGTTGCTCAAAGCTGCCAAGCTTACCTCACCTTCAGATCTCAACCCCTTTACTACTCTGTTTCCACAATTTCTGCTCTGCTAGGCTCTGACCCATCTCAACTTTCTGAAATCAACTCTGTTTCTCTGAATGCCACCTTTCCGACAAATCAATTGGTGATTGTTCCCGTCAACTGTTCCTGTGCAACTGATTATTATCAGACAAACACTTCCTACACAGTCCACAACACAGAAAACTATTTGTTGATTGCTAACAACACTTTCCAAGGCCTCTCAACCTGTCAAGCTATCATGAAGGAAAACAACATTCGTGGAGATTTATTTCCCGGTACAAAACTTACAGTCCCTCTTAGATGCGCTTGTCCCACAAAGAATCAAACTGACAAAGGCGTCAAGTACTTACTGAGTTACTTGGTCACCTGGGGTAATAATGTTCGCCGCATCAGTAAAAAATTTGGTGTGCTCACTGATCTCACTCTTGAATCAAATAGTCTTTCTGGTCAAGATTTTATTTATCCCTTTACCACAATTTTAGTGCCTCTTCAACATAAACCCAACATCTCTAAAATCGTGGCGTCTCCTCCTCCACCATCTCCATCACCCCCACCTTCGTCTTCCTCACGTGGCAGCTCAAATAAGACATGGATATATGCAGTTGTTGGAGCTGCCGGAGGTATTGTCTTGATATCACTCCTTCTCCTTGGTATACTGCTCTTCCGTAAACAGTACCCCAAGAGCCAAAAGAAAGATGATCCTGCAACAGTGTCAAACAGTTTCGAGGCAACAGAGAAACCAGAAGGAAAAAAGGTCGGGGAAGAGTCGGAAACATTGTTGGAGATAATATCCGGCATAGCACAGTCTTTCAAAGTGTACGAATTTAAGGAACTATTGCGTGCAACGGATAATTTCAGTTCAAGCAGCTGCATCGAAGGGAGTGTTCATCGCGGTATGATTAATGGTGATTTGGCCGCTATTAAAAAGATCGATGGCGGTGTGTCGAAAGAGATAGCAATTCTTGACAAAGTCAACCACTGTAATGTAATACGTCTTTCTGGGGTCAGCTTCAACGAGGGCCATTGGTTTCTGGTTTATGAGTATGCCACTAATGGATCCTTGACTGACTGGATCTACGTCAACAACTCGAACGGAAAGTTTTTGACTTGGAGTCAGAGAATGCAAATAGCATTAGATGTGGCCACAGGACTTGACTATCTCCATAATTTCACTTCACCTCCTCTTATCCATAAGGATCTCAAGACTGATAATATCCTGCTCGATAATGACTTGAGGGCCAAAATTGCTAACTTGGGGCTTGCAAGGTCAGTTGAAGGAGAGGATGATCAATTCCCCATGACGAGGCATATTGTTGGGACAAGAGGCTATATGGCTCCTGAGTATCTAGAAAATGGCATAGTTTCTACAAAACAAGATGTGTATGCATTTGGGGTTGTGATGCTGGAAATATTAAGTGGAAAACAGGTTGATGCTATTCATTCAGAAGATAAAGGGAGTTTGTCGGATGTTTTAAGTGTTATTCTTGATGGGGACAGTGAAGAGGAGAAGTTGAGGGATTTTATGGATCCTTCCCTGATTGGGAAGTTTCCATTGGAACTTGCAGTGTTTGTGGTTAGAATGATTGATAATTGCTTGAGGAAAGATCCAGTGAGTCGCCCTGCTATGCATGAAATAGTGTCGTCTCTCTCTGTAATGTTGAACTCTTCATTGGCCTGGGAAAGATCAGCGACCGTCTCAGGAGAACAGAACTTTAGCAGGAGCTCTGGATTTTACCAAGCCTGA 1947 0.4304 MRLFLLISILCFALFCSFPLILGQQPYIGLGTNACPRKGNSKSIRGYTCNGVAQSCQAYLTFRSQPLYYSVSTISALLGSDPSQLSEINSVSLNATFPTNQLVIVPVNCSCATDYYQTNTSYTVHNTENYLLIANNTFQGLSTCQAIMKENNIRGDLFPGTKLTVPLRCACPTKNQTDKGVKYLLSYLVTWGNNVRRISKKFGVLTDLTLESNSLSGQDFIYPFTTILVPLQHKPNISKIVASPPPPSPSPPPSSSSRGSSNKTWIYAVVGAAGGIVLISLLLLGILLFRKQYPKSQKKDDPATVSNSFEATEKPEGKKVGEESETLLEIISGIAQSFKVYEFKELLRATDNFSSSSCIEGSVHRGMINGDLAAIKKIDGGVSKEIAILDKVNHCNVIRLSGVSFNEGHWFLVYEYATNGSLTDWIYVNNSNGKFLTWSQRMQIALDVATGLDYLHNFTSPPLIHKDLKTDNILLDNDLRAKIANLGLARSVEGEDDQFPMTRHIVGTRGYMAPEYLENGIVSTKQDVYAFGVVMLEILSGKQVDAIHSEDKGSLSDVLSVILDGDSEEEKLRDFMDPSLIGKFPLELAVFVVRMIDNCLRKDPVSRPAMHEIVSSLSVMLNSSLAWERSATVSGEQNFSRSSGFYQA 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2219 648 SUPERFAMILY Protein kinase-like (PK-like) 336 617 IPR011009 -
Acco11g2219 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Acco11g2219 648 Pfam Protein kinase domain 380 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2219 648 MobiDBLite consensus disorder prediction 297 320 - -
Acco11g2219 648 MobiDBLite consensus disorder prediction 238 260 - -
Acco11g2219 648 Pfam LysM domain 187 230 IPR018392 -
Acco11g2219 648 Pfam LysM domain 142 166 IPR018392 -
Acco11g2219 648 ProSiteProfiles Protein kinase domain profile. 326 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2219 648 Gene3D Phosphorylase Kinase; domain 1 328 416 - -
Acco11g2219 648 FunFam PTI1-like tyrosine-protein kinase 3 417 631 - -
Acco11g2219 648 MobiDBLite consensus disorder prediction 240 254 - -
Acco11g2219 648 SMART serkin_6 341 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2219 648 Gene3D Transferase(Phosphotransferase) domain 1 418 637 - -
Acco11g2219 648 ProSiteProfiles LysM domain profile. 185 229 IPR018392 -
Acco11g2219 648 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2219 Acco-ChrAcco11 35937087 35939033 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2219 1 631 Receptor kinase-like Gene Family AT2G23770 43.682 1.46e-174 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco11g2219 Pkinase 3.5e-39 CL0016