Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2216 ATGGACTCAGCGGAGTTGACTGTAGAACAAGTTCTGAGGAGGGATATCCCATGGGAGACGTATATGAGCACCAAGTTGATCTCAGGCTCAAGCCTTCAGCTCTTAAGGCGTTATGATCACAAATCACAAAGTCAAAGGGCACAGTTGTTGGATGATGATGGTCCAGCTTATGTACGTGTGTTTGTTCATGTTTTGCGTGATATTCATAAAGATGAGACAGTGGAATACGTTCTGGCCTTAATAGATGAAATGCTTGCAGCAAACCCAAAAAGAGCGAGGTTGTTTCATGATAAGTCGCTTGCAGATGAGGATGCCTATGAACCTTTCTTAAGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTTAGCGCGAGGCCAAAAAATCGGGACAGCAGTGTTGCAAATGGAGAAGCATCAAAATCAAAGAAACCGTTTATTACTATTGATGATGTTTTAAAAGAATTGGTAAAATGGCTTTGTGAACAGCTGAGGAACCCTACTCATCCTAATCGTGGTGTGCCAACTGCTGTCAACTGTTTATCAACTCTTCTTAAGGAACCTATTGTTAGGTCTTCCTTTGTTCAGGCAGGTGGAGTCAAGTTACTTGTACCTTTGATTTCTCCTGCATCCACCCAACAGTCTATTCAGCTCCTATATGAAACATGTCTCTGCATATGGCTCTTATCCTATTATGAGCCAGCAGTTGAATATCTGGCTACTTCAAGAACCCTTCCCCGACTTATTGATGTTGTTAAGAGTTCTACTAAAGAGAAGGTGGTTAGAGTAGTAATCTTAACTCTCAAGAACTTGATGCCAAAAGGGACATTGGGTGCTCAAATGGTTGACCTCCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAGGCATGGAGTGATGAGGACTTGTTGGAGGCGCTGAATTACCTGGAAGAAGGGCTTAAGGATAACATTAAGAAACTTAGTTCCTATGACAAATATAAGCAAGAAGTGCTCCTTGGCAACCTGGATTGGTCTCCTATGCACAAAGATCCTATATTTTGGCGAGAAAATATTACCAACTTTGAAGAAAATGACTTTCAGATTTTAAGGGTTCTATTAACAATTTTAGACACCTCCGGTGATCCAAGAAGTCTGGCTGTTGCATGCTTCGACCTTTCACAATTCGTCCAACATCATCCTGCTGGGAGAATCATAGTGACAGACCTTAAGGCCAAAGAACGGGTGATGAAACTAATGAATCATGAGAACGCTGAGGTCACTAAAAATGCACTGCTCTGCATCCAACGGCTCTTCTTAGGTGCAAAGTATGCAAGCTTTTTGCAGGCCTAG 1344 0.4182 MDSAELTVEQVLRRDIPWETYMSTKLISGSSLQLLRRYDHKSQSQRAQLLDDDGPAYVRVFVHVLRDIHKDETVEYVLALIDEMLAANPKRARLFHDKSLADEDAYEPFLRNWFIQEKSCKILALIVSARPKNRDSSVANGEASKSKKPFITIDDVLKELVKWLCEQLRNPTHPNRGVPTAVNCLSTLLKEPIVRSSFVQAGGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAVEYLATSRTLPRLIDVVKSSTKEKVVRVVILTLKNLMPKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNYLEEGLKDNIKKLSSYDKYKQEVLLGNLDWSPMHKDPIFWRENITNFEENDFQILRVLLTILDTSGDPRSLAVACFDLSQFVQHHPAGRIIVTDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2216 447 SUPERFAMILY ARM repeat 8 437 IPR016024 -
Acco11g2216 447 Gene3D - 5 326 IPR011989 -
Acco11g2216 447 SMART arm_5 397 437 IPR000225 GO:0005515
Acco11g2216 447 SMART arm_5 236 277 IPR000225 GO:0005515
Acco11g2216 447 SMART arm_5 190 235 IPR000225 GO:0005515
Acco11g2216 447 Gene3D - 339 439 IPR038497 -
Acco11g2216 447 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 446 IPR004908 GO:0000221|GO:0046961|GO:1902600
Acco11g2216 447 FunFam V-type proton ATPase subunit H 338 439 - -
Acco11g2216 447 Pfam V-ATPase subunit H 324 436 IPR011987 GO:0000221|GO:1902600
Acco11g2216 447 PIRSF V-ATP_synth_H 2 446 IPR004908 GO:0000221|GO:0046961|GO:1902600
Acco11g2216 447 Pfam V-ATPase subunit H 8 318 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2216 Acco-ChrAcco11 35915889 35921649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2216 1 447 Primary Pumps ATPases(2) AT3G42050 77.655 0.0 728