Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2211 ATGGAAGTGCTTCCATGTTCTGGTGTTCAATATGCCGCTGAATCTGATGGCCGTCAACAGAATTCAGTAACATCTTTTGTTTATGAGGGAGAACCTAATTGCTCTGAAAATGGTGGACGAGTTGAATTGGAGGATGGTCAACTTAATGACTCATTACTTAAAACAAAAGGCCCTCAGGTGGAAGGGCATGGTGCAGTTCAAGAGGCAGATGGCAAACTGTTGGTTAATCCAGATTGGCAGTGCAGTGGAGCCTCAAATTGTGAATGTCAAGCTGTAGACCAAAAGGAATCTTCTAGTTTCCATGCTCTTGATGAGGATGAGATGGATGAAACTTGCTTAATCTCAGAGAACCCTGTTCCATTTGTGGATACAATAGAAAGTGAATCACCAAACAGCAGTAGGGATGGAGAGTTACCACTTGCTGAACCTAGTTGGCTTGAAGGGGACGAGTCTGTGGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGACTGGCATCAGATGTGCAAGGGCTGATTGGCCCTTGTCAACTTTGAGAGCAAAACCTACGCATGGCCGGAAGAAATATTTTGTGATATTTTTTCCACACACAAGGAACTATTCTTGGGCTGACATGATGCTTGTTTGTTCAATTAATGAGTTTCCCCAGCCTATCACATATAAGACCCATCAAGCAGGTTTGAAAATGGTGAAAGATTTGTCCGTTGCCCGACGGTTTATAATGCAAAAACTAGTTGTTGGGATGTTGAACATCATTGACCAATTTCACTTGGATGCTTTAATTGAAGCTGCTCGTGATGTGATGTTCTGGAAGGAGTTTGCTTTGGAGGCTTCCCAAAGTAATGGTTATTCTGATCTGGGAAGAATGCTTCAAAAGCTGCAAAAGAGCATAACACAGCGCTACATAAATGCTAACTGGCTACAGCATTCTTTTCACATTTGGGTTGATCGATGCCAGAACGCAAGTAGTGCTGAATTGGTAGAACTGCTAAAGGAGGAATTGTTTGATTCAATATTGTGGAATGATATCAACACTCTATGGGATGCTCCAGCGCAACCGATATTAGGTTCTGAGTGGAAAACTTGGAAGCATGAAGTGATGAAATGGTTTTTTACCTCTCCTTCATTATCTAGCAGCAAAGACATGCTACAGCAGCAGACTTCTGATGGCCCCCTTCAAGCAAGCCTTCAAGGTTGTCGAAAAAGACCCAAGCTTGAAGTTCGTCGTGCAGAAATACATGCTTCACAAGTAGAAACTAAGGGTTCAGATCACTCTATTGCACTTGAGTCTGACTCAGGCTTCTTTAGTAATCAGGACACAGTGAATACATTAGCAGCTGAGACTAGTAAAAAGGAAGAGCTTAGGGAGGCACCCATTCCAATGGATTCACCAGGTAATTTAGCAAACAAGTGGAATGACATTGTTGTTGAATCTGCTGCAGATTCTGAGCTCTTGCATACCAAAGCTATGGAATCCACACCTACCAATGAAATGGTTGGTCCCAAATCTGTAGAGCTTGGTAGTAAGAATCGACAATGTGTGGCTTATATAGAATCCAAGGGAAGACAATGTGTGAGATGGGCAAATGATGGTGATGTTTACTGTTGCGTGCATTTGTCCTCTCGTTTTTTAGGCAGCTCTGGTAGAGCAGAAAGACCTGTTTCAGTTGATGCTCCTACGTGTGAAGGCACCACTGTTCTTGGCACCAGATGCAAGCATCGAGCCCTTCCTGGCTCTTCGTTCTGTAAGAAACACAGGCCCCACACTGAAACTGACCACACTCCAAATTTACCCCAGACTTCCCAAAAGAGGAAGCATGAAGAAAATTACACTGGTTCGGAGAGCATGTTCTGCAAAGACATAGTACTGGCAGATGCTGAAAGTCCTTTACAAGTGGATCCAGTTTCAGCCATGGATGATGATACCTTCAATGGAAACAGTAACCTGAATGGGAAACCCGTGCATTTTGGAAATGATAATAATGCAATGGAGGAACTTCGCTGTATAGGTTCATCTCCCTTTGGTGACAAGAACCCCTGTTTGGACACTCCAAAGCGGTATTTCTTGTATTGTGAAAAGCACTTGCCAAGCTGGCTCAAACGTGCTCGAAATGGGAAGAGTAGAATAATATCAAAAGAAGTGTTTGCAGAACTTTTGAAGGACTGCTTCTTACAGGAGCAGAAAGTAAATCTACATAAAGCATGTGAGCTTTTTTACAGGCTATTTAAAAGCATTTTATCCCTAAGAAATCCAGTTCCTAAAGAAGTTCAATTCCAGTGGGCTTTGGCTGAAGCTTCTAAAGATACTGGTGTCAAAGAATTATTTAAAAAGTTGGTTCATAGTGAAAAAGAGAGGATCCAAGTAATCTGGGGATTCAACGATGATAAAGATGCACCTTCACTCATTGAAGAAATACCTCAGTTGCCACCCACTGTTAACGATAACTTTGGTAATGAAAATGTCATTGAGTGTAAGATATGCTCTGCAGGATTTCCAGATGACCAAGCACTTGGCAGCCATTGGATGGAAAACCATAAAAAGGAATCACAGTGGCTGTTTAGAGGCTATGCATGTGCTATTTGCCTGGATTCTTTTACCAACAAGAAAGTCTTGGAAAACCATGTCCAGGAGAGACACCATGTGCAATTTGTTGAACAATGTATGCTTTTGCAGTGTATTCCTTGTGGTAGCCATTTCGGAAATATTGAGCAGCTATGGATGCATGTTCTATCAGTTCATCCTGTCCATTTTAAGGCATCAAAAGCCCCTGAGCAGCAAACTTTATCTGCTGGGGACTCTTCAATACAACTAGAAGCAGAGCAGGTAAACTCAGCCTCTTTGGAGGATAATTTGGAAAATTCAGGGGGTTCACGTAAGTTTATTTGTAGGTTTTGTGGGTTAAAGTTTGATTTACTACCTGACCTTGGTCGCCATCATCAAGCTTCTCATATGGGGCCTAATTTACTTAGCAGCCGTCCCTCAAAGAAGGGAGTTCGTTATTATGCATATAGATTAAAATCTGGCAGACTTAGTCGTCCTAGATTCAAAAAAAGTTTGGCGTCTGCATCATATCGGATCAGAAGTAGAGCTAGTGCCAATTTAAAGAGACGCATCCAAGCAACAAAGTCGCTTGGCATTGGGGGAATAACTGTACAACCTCAAGTAACCGAGACAACAAATATTGATAAGTTGGCGGAATATCAATGCTCTGCTGTTGCTAAGATTTTGTTTTCTGAGATCCAAAAGACTATGCCTCGGCCAAACAATCATGATATTCTATCAATTTCTCGCTCTGCCTGCTGCAAAGTTGGCCTTCAAGCTGCACTGGAGGAGAAATTTGGAACTCTGCCTGAAAAGTTGTATCTGAAGGCTGCAAAACTTTGCAGTGAACATAATATTCTAGTGAGTTGGCACCAGGAAGGGTTTAATTGTCCTAGAGGTTGCAAGTTGTTGAAAGACCAACCTTTGCTGTCTCACTTAGCATCTCTTCCTAATGGTTTTGTAAAGCAAAAGGCTTTAATATTGTCAGATCCTGCAGTAGACGAGTGTGAGGTGGATGAGTTTCATTACACCATCAATTCACACCATTTAAAGCCAGAATCCTTGCAAAAGGCTATAGTCTTATGTGATGACATAAGCTTTGGGAAAGAATCAATTCCAGTGATCTGTGTAGTAGATCAAGAACTTCGAAATTCAGTTCATATGTGTGGGTCTAATGAAGATGATATGAATCTTTCTATGCCATGGGAGAGCTTTACCTACATTACAAAGCCAATGCTTGATCAATCCCTGAATCTTGATTCAGAGAGTCTCCAATTGGGATGTTCCTGTTCATATTCTACTTGCAGTCCTGAATTTTGTGCTCACGTGTACCTTTTTGATAATGACTATGAAGATGCAAGGGACATATTTGGAAAATCAATGCGAGGCAGATTCCCCTATGATGACAACGGTCGAATGATTTTAGAGGAAGGTTACCTAGTCTATGAATGCAACTATAGGTGCAGATGTAATAAAGCCTGTCCAAACAGAATTTTGCAAAATGGAGTTCGAGTTAAATTGGAAGTTTTTAAAACAGAGAAAAAGGGATGGGCTATAAGGGCTGGTGAAGCCATCCTACGTGGCACATTTGTGTGTGAGTATGTTGGAGAGGTTTTAAATGAGGAGGAGGCACATAACAGGCGCAAGAGGTCTGGCATAGAAGGTTGCAGTTATTTCCTTGATATTGATGCTCATATTAATGACATGAGCAGATTGATTGAAGGACAAGGTCGATATGTTATTGATGCTTCAAAATATGGAAATGTCTCAAGGTTCATCAATCATAGCTGCTCGCCCAATCTTGTGAATCACCAAGTTCTTGTTGAAAGCATGGACTGTGAACGTACACATATTGGTCTTTATGCTAGTCGAGATATTGCATTGGGGGAAGAACTGACATATGATTATCATTATGAGCTTCTGCCTGGGGAAGGCTCTCCTTGCCACTGTGGATCTTTGAACTGCCGGGGACGCCTTCACTGA 4524 0.4189 MEVLPCSGVQYAAESDGRQQNSVTSFVYEGEPNCSENGGRVELEDGQLNDSLLKTKGPQVEGHGAVQEADGKLLVNPDWQCSGASNCECQAVDQKESSSFHALDEDEMDETCLISENPVPFVDTIESESPNSSRDGELPLAEPSWLEGDESVALWVKWRGKWQTGIRCARADWPLSTLRAKPTHGRKKYFVIFFPHTRNYSWADMMLVCSINEFPQPITYKTHQAGLKMVKDLSVARRFIMQKLVVGMLNIIDQFHLDALIEAARDVMFWKEFALEASQSNGYSDLGRMLQKLQKSITQRYINANWLQHSFHIWVDRCQNASSAELVELLKEELFDSILWNDINTLWDAPAQPILGSEWKTWKHEVMKWFFTSPSLSSSKDMLQQQTSDGPLQASLQGCRKRPKLEVRRAEIHASQVETKGSDHSIALESDSGFFSNQDTVNTLAAETSKKEELREAPIPMDSPGNLANKWNDIVVESAADSELLHTKAMESTPTNEMVGPKSVELGSKNRQCVAYIESKGRQCVRWANDGDVYCCVHLSSRFLGSSGRAERPVSVDAPTCEGTTVLGTRCKHRALPGSSFCKKHRPHTETDHTPNLPQTSQKRKHEENYTGSESMFCKDIVLADAESPLQVDPVSAMDDDTFNGNSNLNGKPVHFGNDNNAMEELRCIGSSPFGDKNPCLDTPKRYFLYCEKHLPSWLKRARNGKSRIISKEVFAELLKDCFLQEQKVNLHKACELFYRLFKSILSLRNPVPKEVQFQWALAEASKDTGVKELFKKLVHSEKERIQVIWGFNDDKDAPSLIEEIPQLPPTVNDNFGNENVIECKICSAGFPDDQALGSHWMENHKKESQWLFRGYACAICLDSFTNKKVLENHVQERHHVQFVEQCMLLQCIPCGSHFGNIEQLWMHVLSVHPVHFKASKAPEQQTLSAGDSSIQLEAEQVNSASLEDNLENSGGSRKFICRFCGLKFDLLPDLGRHHQASHMGPNLLSSRPSKKGVRYYAYRLKSGRLSRPRFKKSLASASYRIRSRASANLKRRIQATKSLGIGGITVQPQVTETTNIDKLAEYQCSAVAKILFSEIQKTMPRPNNHDILSISRSACCKVGLQAALEEKFGTLPEKLYLKAAKLCSEHNILVSWHQEGFNCPRGCKLLKDQPLLSHLASLPNGFVKQKALILSDPAVDECEVDEFHYTINSHHLKPESLQKAIVLCDDISFGKESIPVICVVDQELRNSVHMCGSNEDDMNLSMPWESFTYITKPMLDQSLNLDSESLQLGCSCSYSTCSPEFCAHVYLFDNDYEDARDIFGKSMRGRFPYDDNGRMILEEGYLVYECNYRCRCNKACPNRILQNGVRVKLEVFKTEKKGWAIRAGEAILRGTFVCEYVGEVLNEEEAHNRRKRSGIEGCSYFLDIDAHINDMSRLIEGQGRYVIDASKYGNVSRFINHSCSPNLVNHQVLVESMDCERTHIGLYASRDIALGEELTYDYHYELLPGEGSPCHCGSLNCRGRLH 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2211 1507 Gene3D Classic Zinc Finger 810 882 - -
Acco11g2211 1507 ProSitePatterns Zinc finger C2H2 type domain signature. 892 913 IPR013087 -
Acco11g2211 1507 Gene3D SET domain 1201 1507 IPR046341 -
Acco11g2211 1507 ProSiteProfiles Pre-SET domain profile. 1273 1349 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco11g2211 1507 SMART set_7 1352 1490 IPR001214 GO:0005515
Acco11g2211 1507 ProSiteProfiles Zinc finger C2H2 type domain profile. 856 879 IPR013087 -
Acco11g2211 1507 SMART preset_2 1209 1336 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco11g2211 1507 Pfam Zinc finger C2H2-type, 3 repeats 858 984 IPR040689 -
Acco11g2211 1507 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1507 - -
Acco11g2211 1507 ProSiteProfiles Post-SET domain profile. 1491 1507 IPR003616 -
Acco11g2211 1507 Pfam Pre-SET motif 1213 1344 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco11g2211 1507 ProSitePatterns Zinc finger C2H2 type domain signature. 824 845 IPR013087 -
Acco11g2211 1507 SUPERFAMILY SET domain 1201 1497 IPR046341 -
Acco11g2211 1507 Pfam SET domain 1363 1483 IPR001214 GO:0005515
Acco11g2211 1507 ProSitePatterns Zinc finger C2H2 type domain signature. 962 983 IPR013087 -
Acco11g2211 1507 ProSiteProfiles Zinc finger C2H2 type domain profile. 960 988 IPR013087 -
Acco11g2211 1507 MobiDBLite consensus disorder prediction 582 609 - -
Acco11g2211 1507 ProSiteProfiles SET domain profile. 1352 1484 IPR001214 GO:0005515
Acco11g2211 1507 SMART c2h2final6 890 913 IPR013087 -
Acco11g2211 1507 SMART c2h2final6 856 879 IPR013087 -
Acco11g2211 1507 SMART c2h2final6 822 845 IPR013087 -
Acco11g2211 1507 SMART c2h2final6 960 983 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2211 Acco-ChrAcco11 35858552 35872654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2211 135 1506 C2H2 Transcription Factor Family AT2G23740 51.620 0.0 1385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco11g2211 Pre-SET 1.5e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2211 11 35858552 35872654 Acco11g2211 11 35858552 35872654 ECH